STRINGSTRING
AT1G20180 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G20180" - Uncharacterized protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G20180Uncharacterized protein (390 aa)    
Predicted Functional Partners:
CIPK17
CBL-interacting protein kinase 17; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium- dependent manner (By similarity) (432 aa)
     
        0.441
AT5G49600
Uncharacterized protein (171 aa)
     
        0.438
NAC055
NAC domain containing protein 3; Transcription factors that bind specifically to the 5’- CATGTG-3’ motif (317 aa)
     
        0.438
AT2G31945
Uncharacterized protein (95 aa)
     
        0.438
AT1G62760
Plant invertase/pectin methylesterase inhibitor superfamily protein (312 aa)
     
        0.436
AT5G39520
Uncharacterized protein (230 aa)
     
        0.435
CYP91A2
Cytochrome P450 81F1; Involved in indole glucosinolate biosynthesis. Catalyzes hydroxylation reactions of the glucosinolate indole ring. Converts indol-3-yl-methylglucosinolate (I3M) to 4-hydroxy-indol-3-yl- methylglucosinolate (4OH-I3M) and/or 1-hydroxy-indol-3-yl- methylglucosinolate (1OH-I3M) intermediates. These hydroxy intermediates are converted to 4-methoxy-indol-3-yl- methylglucosinolate (4MO-I3M) and 1-methoxy-indol-3-yl- methylglucosinolate (1MO-I3M) by indole glucosinolate methyltransferase 1 and 2 (IGMT1 and IGMT2) (500 aa)
     
        0.407
AT5G38710
Proline dehydrogenase 2; Converts proline to delta-1-pyrroline-5-carboxylate (476 aa)
     
        0.402
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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