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AT1G20225 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G20225" - TRX domain-containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G20225TRX domain-containing protein (233 aa)    
Predicted Functional Partners:
POP4
Similar to yeast POP4 (296 aa)
       
 
  0.699
GAF1
GAMETOPHYTE DEFECTIVE 1 (705 aa)
       
 
  0.690
EMB1687
EMBRYO DEFECTIVE 1687; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5’-ends. Also a component of RNase MRP (By similarity) (151 aa)
       
 
  0.690
AT5G20160
U4/U6 small nuclear ribonucleoprotein SNU13 (160 aa)
     
 
  0.553
AT4G22380
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (128 aa)
     
 
  0.553
AT4G12600
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (183 aa)
     
 
  0.553
AT4G01790
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (167 aa)
     
 
  0.553
WOX5
WUSCHEL related homeobox 5; Transcription factor, which may be involved in the specification and maintenance of the stem cells (QC cells) in the root apical meristem (RAM) (182 aa)
       
      0.543
POP1
Ribonuclease P (826 aa)
     
      0.533
THY-1
Thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism. Can play two different roles depending on the source of dihydrofolate- de novo synthesis of tetrahydrofolate or recycling of the dihydrofolate released as one of the end products of the TS catalyzed reaction. Catalyzes an essential reaction for de novo glycine and purine synthesis, DNA precursor synthesis, and for the conversion of dUMP to dTMP (519 aa)
     
   
  0.508
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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