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AT1G20225 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G20225" - Uncharacterized protein At1g20220 in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AT1G20225Uncharacterized protein At1g20220; Thioredoxin superfamily protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in vacuole; Contains the following InterPro domains- Thioredoxin-like fold (InterPro-IPR012336); BEST Arabidopsis thaliana protein match is- Thioredoxin superfamily protein (TAIR-AT1G76020.1); Has 208 Blast hits to 204 proteins in 76 species- Archae - 0; Bacteria - 103; Metazoa - 14; Fungi - 6; Plants - 51; Viruses - 0; Other Eukaryotes - 34 (source- NCBI BLink) (233 aa)    
Predicted Functional Partners:
POP4
Ribonuclease P family protein; Its function is described as ribonuclease activity, ribonuclease P activity, RNA binding; Involved in tRNA processing, mRNA cleavage, rRNA processing; Located in ribonuclease P complex, nucleolar ribonuclease P complex, ribonuclease MRP complex; Expressed in 23 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Ribonuclease P/MRP, subunit p29, eukaryotic/archaeal (InterPro-IPR002730), Ribonuclease P/MRP, p29 subunit, eukaryotic (InterPro-IPR016848); Has 293 Blast hits to 293 proteins in 155 species- Archae - 0; B [...] (296 aa)
     
 
  0.876
GAF1
Polymerase/histidinol phosphatase-like; Its function is described as tRNA-intron endonuclease activity, ribonuclease activity, catalytic activity; Involved in tRNA processing; Located in cellular_component unknown; Expressed in trichome; Contains the following InterPro domains- Polymerase/histidinol phosphatase-like (InterPro-IPR016195), RNase P subunit p30 (InterPro-IPR002738); Has 1908 Blast hits to 1535 proteins in 339 species- Archae - 16; Bacteria - 381; Metazoa - 491; Fungi - 307; Plants - 100; Viruses - 13; Other Eukaryotes - 600 (source- NCBI BLink) (705 aa)
     
 
  0.871
EMB1687
Ribonuclease P family protein / Rpp14 family protein; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5’-ends. Also a component of RNase MRP (By similarity) (151 aa)
     
 
  0.869
AT5G20160
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Its function is described as RNA binding; Involved in ribosome biogenesis; Located in nucleolus; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro-IPR002415), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro-IPR004038), Ribosomal protein L7Ae conserved site (InterPro-IPR004037); BEST Arabidopsis thaliana protein match is- Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR-AT4G22380.1); Has 1455 [...] (160 aa)
     
 
  0.612
AT4G22380
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Its function is described as RNA binding; Involved in ribosome biogenesis; Located in nucleolus; Expressed in 21 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro-IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro-IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro-IPR004038), Ribosomal protein L7Ae conserved site (InterPro-IPR004037); BEST Arabidopsis thaliana protein match is- Ribosomal protein L7Ae/L [...] (128 aa)
     
 
  0.612
AT4G12600
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Its function is described as RNA binding; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote (InterPro-IPR002415), Ribosomal protein L7Ae/L8/Nhp2 family (InterPro-IPR018492), Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro-IPR004038); BEST Arabidopsis thaliana protein match is- Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (TAIR-AT5G20160.2) (183 aa)
     
 
  0.612
AT4G01790
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Contains the following InterPro domains- Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro-IPR004038); Has 95 Blast hits to 95 proteins in 35 species- Archae - 3; Bacteria - 0; Metazoa - 62; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 3 (source- NCBI BLink) (167 aa)
     
 
  0.612
WOX5
WUSCHEL related homeobox 5; Transcription factor, which may be involved in the specification and maintenance of the stem cells (QC cells) in the root apical meristem (RAM) (182 aa)
       
      0.491
AT1G10310
NAD(P)-binding Rossmann-fold superfamily protein; NADPH-dependent pterin aldehyde reductase involved in pterin aldehyde salvage during folate turnover. Catalyzes the reduction of diverse aromatic and aliphatic aldehydes (e.g. acetaldehyde, n-propanal, 1-naphthaldehyde, benzaldehyde, cinnamaldehyde, n-butanal, n-hexanal, n-pentanal, 2- naphthaldehyde, n-octanal, n-nonanal and n-heptanal), in addition to the conversion of pterin-6-aldehyde (PtCHO) to 6- hydroxymethylpterin (PtCH(2)OH), and the conversion of dihydropterin-6-aldehyde (H(2)PtCHO) to 6- hydroxymethyldihydropterin (H(2)PtCH(2 [...] (242 aa)
           
  0.459
NAC036
NAC domain containing protein 36; Member of the NAC transcription factor family and more specifically, the ONAC022 subfamily. Involved in leaf and inflorescence stem morphogenesis (276 aa)
           
  0.457
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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