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AT1G20310 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G20310" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G20310Uncharacterized protein (240 aa)    
Predicted Functional Partners:
AT3G02840
ARM repeat superfamily protein (379 aa)
     
        0.611
AT3G01830
Calcium-binding EF-hand family protein; Potential calcium sensor (146 aa)
     
        0.574
WRKY40
WRKY DNA-binding protein 40; Transcription factor. Interacts specifically with the W box (5’-(T)TGAC[CT]-3’), a frequently occurring elicitor- responsive cis-acting element (By similarity) (302 aa)
     
        0.573
CML37
Calmodulin like 37; Potential calcium sensor that binds calcium in vitro (185 aa)
     
        0.566
WRKY46
WRKY DNA-binding protein 46; Transcription factor involved in the regulation of osmotic stress responses and stomatal movement (PubMed-24773321). Interacts specifically with the W box (5’-(T)TGAC[CT]-3’), a frequently occurring elicitor-responsive cis-acting element (By similarity) (295 aa)
     
        0.566
AT2G32030
GCN5-related N-acetyltransferase-like protein (188 aa)
     
        0.557
MYB15
Myb domain protein 15 (285 aa)
     
        0.550
ZAT11
Zinc finger of Arabidopsis thaliana 11; Probable transcription factor that may be involved in stress responses (178 aa)
     
        0.544
AT2G32140
Transmembrane receptors (353 aa)
     
        0.530
ERF13
Ethylene-responsive transcription factor 13; Acts as a transcriptional activator. Binds to the GCC- box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (226 aa)
     
        0.529
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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