• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
DRT112 protein (Arabidopsis thaliana) - STRING interaction network
"DRT112" - Plastocyanin major isoform, chloroplastic in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DRT112Plastocyanin major isoform, chloroplastic; Recombination and DNA-damage resistance protein (DRT112) One of two Arabidopsis plastocyanin genes. Predominant form, expressed 10x higher than PETE1. PETE2 is thought to be post-transcriptionally regulated via copper accumulation and is involved in copper homeostasis (167 aa)    
Predicted Functional Partners:
PSAD-1
Photosystem I reaction center subunit II-1, chloroplastic; PsaD can form complexes with ferredoxin and ferredoxin- oxidoreductase in photosystem I (PS I) reaction center. PSAD may encode the ferredoxin-docking protein (208 aa)
     
   
  0.996
PSBO1
Oxygen-evolving enhancer protein 1-1, chloroplastic; Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In <i>Arabidopsis thaliana</i> the PsbO proteins are encoded by two genes- <i>psbO1</i> and <i>psbO2</i>. PsbO1 is the major isoform in the wild-type (332 aa)
     
   
  0.995
PSAF
Photosystem I reaction center subunit III, chloroplastic; Participates in efficiency of electron transfer from plastocyanin to P700 (or cytochrome c553 in algae and cyanobacteria). This plastocyanin-docking protein contributes to the specific association of plastocyanin to PSI (221 aa)
     
   
  0.995
PSAG
Photosystem I reaction center subunit V, chloroplastic; Encodes subunit G of photosystem I, an 11-kDa membrane protein that plays an important role in electron transport between plastocyanin and PSI and is involved in the stability of the PSI complex. PSI-G subunit is bound to PSI-B and is in contact with Lhca1. The protein inserts into thylakoids by a direct or "spontaneous" pathway that does not involve the activities of any known chloroplast protein-targeting machinery. PSI-G appears to be directly or indirectly involved in the interaction between Photosystem I and plastocyanin (160 aa)
     
   
  0.995
PSBY
Photosystem II core complex proteins psbY, chloroplastic; PsbY precursor (psbY) mRNA. This single nuclear gene is imported into the chloroplasts where it is processed into two integral membrane proteins with identical topology (PsbY-1 and PsbY-2). The protein appears to bind manganese but its role is not well understood (189 aa)
     
   
  0.995
PSAL
Encodes subunit L of photosystem I reaction center; Belongs to the PsaL family (219 aa)
   
   
  0.994
PSBO2
Oxygen-evolving enhancer protein 1-2, chloroplastic; Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In <i>Arabidopsis thaliana</i> the PsbO proteins are encoded by two genes- <i>psbO1</i> and <i>psbO2</i>. PsbO2 is the minor isoform in the wild-type. Mutants defective in this gene have been shown to be affected in the dephosphorylation of the D1 protein of PSII (331 aa)
     
   
  0.993
AT2G26500
Cytochrome b6f complex subunit (petM), putative; Its function is described as plastoquinol-plastocyanin reductase activity; Located in chloroplast thylakoid membrane; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- PetM of cytochrome b6/f complex subunit 7 (InterPro-IPR012595); Has 54 Blast hits to 54 proteins in 16 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (125 aa)
     
   
  0.992
LHCB4.1
Chlorophyll a-b binding protein CP29.1, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b- binding (LHC) protein family (290 aa)
     
   
  0.992
PSAD-2
Photosystem I reaction center subunit II-2, chloroplastic; PSAD can form complexes with ferredoxin and ferredoxin- oxidoreductase in photosystem I (PS I) reaction center. PSAD may encode the ferredoxin-docking protein (By similarity) (204 aa)
     
   
  0.991
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (15%) [HD]