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AT1G20370 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G20370" - Pseudouridine synthase-like protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G20370Pseudouridine synthase-like protein (549 aa)    
Predicted Functional Partners:
NAP57
Homologue of NAP57; Plays a central role in ribosomal RNA processing. Probable catalytic subunit of H/ACA small nucleolar ribonucleoprotein (H/ACA snoRNP) complex, which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine (’psi’) residues may serve to stabilize the conformation of rRNAs (By similarity) (565 aa)
     
  0.853
AT5G14460
tRNA pseudouridine synthase B (540 aa)
     
  0.830
AT2G43030
50S ribosomal protein L3-1; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (271 aa)
   
 
  0.785
AT3G49080
Small subunit ribosomal protein S9 (430 aa)
   
   
  0.778
AT1G67430
60S ribosomal protein L17-2 (175 aa)
         
  0.755
AT4G40000
S-adenosyl-L-methionine-dependent methyltransferase-like protein (783 aa)
     
 
  0.731
AT3G52905
Polynucleotidyl transferase/ ribonuclease H-like protein (170 aa)
   
   
  0.728
RPL3P
50S ribosomal protein L3-2; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (324 aa)
   
 
  0.725
CPR
Metallopeptidase M24 domain-containing protein; Binds RNA. Associates with 28S, 18S and 5.8S mature rRNAs, several rRNA precursors and probably U3 small nucleolar RNA. May be involved in regulation of intermediate and late steps of rRNA processing. May be involved in ribosome assembly (By similarity). Required for expression of cell cycle genes such as CYCD3-1, RNR2A and CDKB1-1. Promotes, in a dose- and auxin- dependent manner, organ growth by stimulating both cell proliferation and expansion, via the regulation of RBR1 levels (PubMed-17024182) (401 aa)
   
   
  0.724
AT5G15750
Alpha-L RNA-binding motif/Ribosomal protein S4 family protein (182 aa)
   
 
  0.720
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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