STRINGSTRING
AT1G20680 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G20680" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G20680Uncharacterized protein (266 aa)    
Predicted Functional Partners:
AT5G51950
Glucose-methanol-choline (GMC) oxidoreductase family protein (586 aa)
     
   
  0.918
AT2G47115
Uncharacterized protein (300 aa)
     
   
  0.906
AT5G42530
Uncharacterized protein (71 aa)
           
  0.866
AT1G49450
WD40 domain-containing protein (471 aa)
           
  0.866
AT2G17710
Uncharacterized protein (152 aa)
     
   
  0.865
TBL38
TRICHOME BIREFRINGENCE-LIKE 38; May be involved in the specific O-acetylation of cell wall polymers (380 aa)
           
  0.848
TET10
Tetraspanin10; May be involved in the regulation of cell differentiation (284 aa)
           
  0.805
SVL3
SHV3-like 3 (729 aa)
     
   
  0.741
AT5G62210
Embryo-specific protein 3, (ATS3) (223 aa)
     
   
  0.719
MLP328
MLP-like protein 328 (151 aa)
           
  0.676
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (14%) [HD]