STRINGSTRING
AT1G20730 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G20730" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G20730Uncharacterized protein (256 aa)    
Predicted Functional Partners:
AT5G46300
Uncharacterized protein (208 aa)
     
   
  0.871
AT1G61090
Uncharacterized protein (118 aa)
     
   
  0.847
AT1G52460
alpha/beta-Hydrolases superfamily protein (230 aa)
     
   
  0.847
AT1G51000
Uncharacterized protein (72 aa)
     
   
  0.846
AT1G12180
Uncharacterized protein (119 aa)
     
   
  0.844
AT3G57250
Emsy N Terminus (ENT) domain-containing protein (142 aa)
     
   
  0.829
SK8
SKP1-like 8; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F- box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends of the type of F- box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity) (152 aa)
     
   
  0.787
AT3G10590
SANT DNA-binding domain-containing protein (206 aa)
     
   
  0.770
AT5G54350
Uncharacterized protein (261 aa)
           
  0.739
AT5G03020
F-box/kelch-repeat protein (347 aa)
           
  0.739
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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