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AT1G20790 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G20790" - Putative F-box/kelch-repeat protein At1g20790 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AT1G20790Putative F-box/kelch-repeat protein At1g20790; F-box family protein; Contains the following InterPro domains- F-box domain, cyclin-like (InterPro-IPR001810), F-box domain, Skp2-like (InterPro-IPR022364), F-box associated interaction domain (InterPro-IPR017451); BEST Arabidopsis thaliana protein match is- F-box family protein (TAIR-AT1G20795.1); Has 1819 Blast hits to 716 proteins in 166 species- Archae - 2; Bacteria - 445; Metazoa - 392; Fungi - 63; Plants - 395; Viruses - 75; Other Eukaryotes - 447 (source- NCBI BLink) (435 aa)
 
Sorry, there are no predicted associations at the current settings.
 
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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