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AT1G21000 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G21000" - PLATZ transcription factor family protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G21000PLATZ transcription factor family protein; Contains the following InterPro domains- Protein of unknown function DUF597 (InterPro-IPR006734); BEST Arabidopsis thaliana protein match is- PLATZ transcription factor family protein (TAIR-AT1G76590.1); Has 403 Blast hits to 403 proteins in 26 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 403; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (246 aa)    
Predicted Functional Partners:
AT5G58750
NAD(P)-binding Rossmann-fold superfamily protein; BEST Arabidopsis thaliana protein match is- NAD(P)-binding Rossmann-fold superfamily protein (TAIR-AT4G24220.2); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (386 aa)
           
  0.897
AT4G25680
PPPDE putative thiol peptidase family protein; Contains the following InterPro domains- Protein of unknown function DUF862, eukaryotic (InterPro-IPR008580); BEST Arabidopsis thaliana protein match is- PPPDE putative thiol peptidase family protein (TAIR-AT4G25660.1); Has 754 Blast hits to 754 proteins in 155 species- Archae - 0; Bacteria - 0; Metazoa - 207; Fungi - 56; Plants - 348; Viruses - 0; Other Eukaryotes - 143 (source- NCBI BLink) (252 aa)
           
  0.897
AT4G25660
PPPDE putative thiol peptidase family protein; Contains the following InterPro domains- Protein of unknown function DUF862, eukaryotic (InterPro-IPR008580); BEST Arabidopsis thaliana protein match is- PPPDE putative thiol peptidase family protein (TAIR-AT4G25680.1); Has 753 Blast hits to 753 proteins in 154 species- Archae - 0; Bacteria - 0; Metazoa - 205; Fungi - 55; Plants - 348; Viruses - 0; Other Eukaryotes - 145 (source- NCBI BLink) (255 aa)
           
  0.897
AT1G74620
RING/U-box superfamily protein; Its function is described as zinc ion binding; Contains the following InterPro domains- Zinc finger, RING-type (InterPro-IPR001841), Zinc finger, C3HC4 RING-type (InterPro-IPR018957); BEST Arabidopsis thaliana protein match is- RING/U-box superfamily protein (TAIR-AT2G29840.1); Has 10007 Blast hits to 9980 proteins in 284 species- Archae - 0; Bacteria - 0; Metazoa - 2594; Fungi - 843; Plants - 5042; Viruses - 48; Other Eukaryotes - 1480 (source- NCBI BLink) (249 aa)
           
  0.897
AT5G60140
AP2/B3-like transcriptional factor family protein; Its function is described as DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, DNA-dependent; Located in cellular_component unknown; Expressed in 7 plant structures; Expressed during 4 anthesis, C globular stage, petal differentiation and expansion stage; Contains the following InterPro domains- Transcriptional factor B3 (InterPro-IPR003340); BEST Arabidopsis thaliana protein match is- AP2/B3-like transcriptional factor family protein (TAIR-AT5G60130.2); Has 1807 Blast hi [...] (328 aa)
           
  0.838
AT5G32460
Transcriptional factor B3 family protein; Its function is described as DNA binding; Involved in regulation of transcription, DNA-dependent; Located in cellular_component unknown; Expressed in embryo, seed; Expressed during E expanded cotyledon stage; Contains the following InterPro domains- Transcriptional factor B3 (InterPro-IPR003340); BEST Arabidopsis thaliana protein match is- Transcriptional factor B3 family protein (TAIR-AT4G00260.1); Has 518 Blast hits to 261 proteins in 12 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 518; Viruses - 0; Other Eukaryotes - 0 [...] (530 aa)
           
  0.838
AT3G17020
Adenine nucleotide alpha hydrolases-like superfamily protein; Its function is described as molecular_function unknown; Involved in response to cold, response to stress; Located in plasma membrane; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- UspA (InterPro-IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro-IPR014729), Universal stress protein A (InterPro-IPR006015); BEST Arabidopsis thaliana protein match is- Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR-AT3G03270.2); Has 3326 Blast hi [...] (163 aa)
           
  0.811
PLC5
Phosphatidylinositol-speciwc phospholipase C5; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes (578 aa)
           
  0.795
AT4G17720
RNA-binding (RRM/RBD/RNP motifs) family protein; Its function is described as oxidoreductase activity, nucleotide binding, nucleic acid binding; Involved in oxidation reduction; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Aldo/keto reductase (InterPro-IPR001395), RNA recognition motif, RNP-1 (InterPro-IPR000504), Nucleotide-binding, alpha-beta plait (InterPro-IPR012677); BEST Arabidopsis thaliana protein match is- RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR-AT5G46870.1); Has 30201 Blast hits to 17322 proteins i [...] (313 aa)
           
  0.787
NF-YA3
Nuclear transcription factor Y subunit A-3; Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues (341 aa)
     
 
  0.778
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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