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AT1G21150 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G21150" - Mitochondrial transcription termination factor family protein in Arabidopsis thaliana
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AT1G21150Mitochondrial transcription termination factor family protein; Contains the following InterPro domains- Mitochodrial transcription termination factor-related (InterPro-IPR003690); BEST Arabidopsis thaliana protein match is- Mitochondrial transcription termination factor family protein (TAIR-AT5G07900.1); Has 922 Blast hits to 791 proteins in 36 species- Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 903; Viruses - 0; Other Eukaryotes - 10 (source- NCBI BLink) (390 aa)    
Predicted Functional Partners:
AT5G45113
Mitochondrial transcription termination factor-related / mTERF-related; Contains the following InterPro domains- Mitochodrial transcription termination factor-related (InterPro-IPR003690); BEST Arabidopsis thaliana protein match is- Mitochondrial transcription termination factor family protein (TAIR-AT4G19650.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (414 aa)
           
  0.760
AT5G06810
Mitochondrial transcription termination factor family protein; Contains the following InterPro domains- Mitochodrial transcription termination factor-related (InterPro-IPR003690); BEST Arabidopsis thaliana protein match is- Mitochondrial transcription termination factor family protein (TAIR-AT4G19650.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (1141 aa)
           
  0.732
PSRP3/2
30S ribosomal protein 3-2, chloroplastic; Probably a ribosomal protein or a ribosome-associated protein (183 aa)
     
 
  0.555
AT3G20230
Ribosomal L18p/L5e family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in ribosome, intracellular, chloroplast; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L18/L5 (InterPro-IPR005484); BEST Arabidopsis thaliana protein match is- Ribosomal L18p/L5e family protein (TAIR-AT1G08845.2); Has 1330 Blast hits to 1330 proteins in 478 species- Archae - 0; Bacteria - 978; Metazoa - 36; Fungi - 0; Plants - 142; Viruses - 0; Other Eukaryotes - 174 (source [...] (187 aa)
     
 
  0.537
AT1G01080
RNA-binding (RRM/RBD/RNP motifs) family protein; Its function is described as RNA binding, nucleotide binding, nucleic acid binding; Involved in biological_process unknown; Located in chloroplast; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- RNA recognition motif, RNP-1 (InterPro-IPR000504), Nucleotide-binding, alpha-beta plait (InterPro-IPR012677); BEST Arabidopsis thaliana protein match is- RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR-AT1G60000.1); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae [...] (294 aa)
     
 
  0.523
PRPL28
50S ribosomal protein L28, chloroplastic; Ribosomal L28 family; Its function is described as structural constituent of ribosome; Involved in translation; Located in ribosome, chloroplast, membrane; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L28 (InterPro-IPR001383); Has 3594 Blast hits to 3594 proteins in 1265 species- Archae - 0; Bacteria - 2589; Metazoa - 1; Fungi - 7; Plants - 57; Viruses - 0; Other Eukaryotes - 940 (source- NCBI BLink) (143 aa)
     
 
  0.520
AT2G35410
RNA-binding (RRM/RBD/RNP motifs) family protein; Its function is described as RNA binding, nucleotide binding, nucleic acid binding; Located in thylakoid, chloroplast stroma, chloroplast; Expressed in 23 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- RNA recognition motif, RNP-1 (InterPro-IPR000504), Nucleotide-binding, alpha-beta plait (InterPro-IPR012677); BEST Arabidopsis thaliana protein match is- RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR-AT4G09040.1); Has 25515 Blast hits to 17648 proteins in 833 species- Archae - 12; Bact [...] (308 aa)
     
 
  0.507
AT4G12640
RNA recognition motif (RRM)-containing protein; Its function is described as RNA binding, nucleotide binding, nucleic acid binding; Involved in biological_process unknown; Located in cellular_component unknown; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Spen paralogue and orthologue SPOC, C-terminal (InterPro-IPR012921), RNA recognition motif, RNP-1 (InterPro-IPR000504), Nucleotide-binding, alpha-beta plait (InterPro-IPR012677); BEST Arabidopsis thaliana protein match is- RNA binding (TAIR-AT2G43410.4); Has 8554 Blast h [...] (823 aa)
       
 
  0.506
AT4G02820
Pentatricopeptide repeat-containing protein At4g02820, mitochondrial; Pentatricopeptide repeat (PPR) superfamily protein; Contains the following InterPro domains- Pentatricopeptide repeat (InterPro-IPR002885); BEST Arabidopsis thaliana protein match is- Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR-AT1G02150.1); Has 15018 Blast hits to 7498 proteins in 232 species- Archae - 0; Bacteria - 55; Metazoa - 87; Fungi - 92; Plants - 14442; Viruses - 0; Other Eukaryotes - 342 (source- NCBI BLink) (532 aa)
     
 
  0.489
MEE40
Pentatricopeptide repeat-containing protein At3g53700, chloroplastic; May be involved in female gametophyte development (754 aa)
     
 
  0.481
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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