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AT1G21320 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G21320" - Nucleic acid/nucleotide binding protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G21320Nucleic acid/nucleotide binding protein; Alternative splicing (AS) regulator that binds to specific mRNAs and modulates auxin effects on the transcriptome. Displaced from its targets upon binding to AS competitor long non- coding RNA (ASCO-RNA) (421 aa)    
Predicted Functional Partners:
AT5G65170
VQ motif-containing protein (362 aa)
           
  0.737
AT5G53830
VQ motif-containing protein; May modulate WRKY transcription factor activities (243 aa)
           
  0.737
AT5G46780
VQ motif-containing protein (237 aa)
           
  0.737
AT5G08480
VQ motif-containing protein; May modulate WRKY transcription factor activities (173 aa)
           
  0.737
AT4G39720
VQ motif-containing protein (290 aa)
           
  0.737
AT3G60090
VQ motif-containing protein (157 aa)
           
  0.737
AT2G33780
VQ motif-containing protein; May modulate WRKY transcription factor activities (204 aa)
           
  0.737
AT2G22880
VQ motif-containing protein (114 aa)
           
  0.737
AT1G35830
VQ motif-containing protein (302 aa)
           
  0.737
AT1G32610
Hydroxyproline-rich glycoprotein-like protein (291 aa)
           
  0.737
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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