STRINGSTRING
emb2170 protein (Arabidopsis thaliana) - STRING interaction network
"emb2170" - Embryo defective 2170 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emb2170Embryo defective 2170 (248 aa)    
Predicted Functional Partners:
emb2735
Embryo defective 2735 (162 aa)
           
  0.630
emb1441
Embryo defective 1441 (1080 aa)
           
  0.602
EMB1793
EMBRYO DEFECTIVE 1793 (157 aa)
           
  0.602
AT5G40600
Uncharacterized protein (325 aa)
           
  0.601
emb1353
Protein embryo defective 1353 (388 aa)
           
  0.601
EMB2016
Embryo defective 2016 (2152 aa)
           
  0.601
emb2410
Embryo defective 2410 (2166 aa)
           
  0.601
emb2204
Embryo defective 2204; May be involved in embryogenesis (329 aa)
           
  0.601
AT1G04590
Uncharacterized protein (384 aa)
           
  0.601
EMB2423
EMBRYO DEFECTIVE 2423 (1027 aa)
           
  0.600
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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