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STRINGSTRING
AT1G21395 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G21395" - Unknown protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G21395Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT2G26865.1); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (73 aa)    
Predicted Functional Partners:
AT3G16895
Encodes a defensin-like (DEFL) family protein (83 aa)
     
        0.422
RALFL3
Protein RALF-like 3; Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity) (90 aa)
     
        0.420
AT1G43666
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Its function is described as molecular_function unknown; Involved in lipid transport; Located in endomembrane system; Contains the following InterPro domains- Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro-IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro-IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro-IPR013770); BEST Arabidopsis thaliana protein match is- Bifunctional inhibitor/lipid [...] (96 aa)
     
        0.420
AT3G49307
Expressed protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; BEST Arabidopsis thaliana protein match is- proline-rich family protein (TAIR-AT3G49300.1); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (76 aa)
     
        0.416
AT1G43667
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Its function is described as molecular_function unknown; Involved in lipid transport; Located in endomembrane system; Contains the following InterPro domains- Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro-IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro-IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro-IPR013770); BEST Arabidopsis thaliana protein match is- Bifunctional inhibitor/lipid [...] (98 aa)
     
        0.416
AT3G17155
Encodes a defensin-like (DEFL) family protein (80 aa)
     
        0.403
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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