STRINGSTRING
AT1G21395 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G21395" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G21395Uncharacterized protein (73 aa)    
Predicted Functional Partners:
AT5G67120
RING/U-box superfamily protein (272 aa)
     
        0.438
AT5G46025
Ras-related small GTP-binding family protein (113 aa)
     
        0.438
LCR57
Putative defensin-like protein 179 (120 aa)
     
        0.438
MYB22
Myb domain protein 22 (256 aa)
     
        0.438
AT5G37473
Putative defensin-like protein 277 (73 aa)
     
        0.438
AT5G17470
EF hand calcium-binding protein family; Potential calcium sensor (146 aa)
     
        0.438
HDG9
Homeodomain GLABROUS 9; Probable transcription factor that binds to the DNA sequence 5’-GCATTAAATGCGCA-3’ (718 aa)
     
        0.438
RR21
Response regulator 21; Putative transcriptional activator that binds specifically to the DNA sequence 5’-[AG]GATT-3’. Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins (By similarity) (621 aa)
     
        0.438
AT5G07160
DNA binding protein (150 aa)
     
        0.438
LCR27
Defensin-like protein 161 (77 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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