STRINGSTRING
AT1G21500 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G21500" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G21500Uncharacterized protein (126 aa)    
Predicted Functional Partners:
AT2G42220
Rhodanese-like domain-containing protein (234 aa)
     
        0.840
AT1G51400
Photosystem II 5 kD protein (106 aa)
     
        0.833
LHCB2.3
Photosystem II light harvesting complex gene 2.3 (266 aa)
     
        0.815
PSAD-2
Photosystem I subunit D-2; PSAD can form complexes with ferredoxin and ferredoxin- oxidoreductase in photosystem I (PS I) reaction center. PSAD may encode the ferredoxin-docking protein (By similarity) (204 aa)
     
        0.814
PSAH2
Photosystem I subunit H2; Possible role could be the docking of the LHC I antenna complex to the core complex (145 aa)
     
        0.805
LQY1
LOW QUANTUM YIELD OF PHOTOSYSTEM II 1; Protein disulfide-isomerase probably involved upon formation of a complex with HHL1 in maintaining photosystem II (PSII) activity under high light by regulating repair and reassembly of PSII complexes (154 aa)
     
        0.804
LHCB6
Light harvesting complex photosystem II subunit 6 (258 aa)
     
        0.801
LHCB4.2
Chlorophyll a-b binding protein CP29.2; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (287 aa)
     
        0.797
AT1G52220
Uncharacterized protein; Determines thylakoid architecture by inducing membrane curvature (156 aa)
     
        0.788
PETE1
Plastocyanin 1; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Seems to be a minor plastocyanin in Arabidopsis (171 aa)
     
        0.773
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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