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AT1G21790 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G21790" - TRAM, LAG1 and CLN8 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
AT1G21790TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (288 aa)    
Predicted Functional Partners:
AT4G33905
Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (261 aa)
     
      0.759
AT1G73920
alpha/beta-Hydrolases superfamily protein (704 aa)
     
      0.621
PORC
Protochlorophyllide reductase C; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide) (401 aa)
       
      0.599
NAC089
NAC domain containing protein 89; Transcription factor involved in plant cell division (340 aa)
       
      0.588
AT4G19370
Uncharacterized protein (217 aa)
       
      0.588
RABA1e
RAB GTPase homolog A1E; Intracellular vesicle trafficking and protein transport (217 aa)
       
      0.588
BTI2
Reticulon-like protein B2; Plays a role in the Agrobacterium-mediated plant transformation via its interaction with VirB2, the major component of the T-pilus (271 aa)
       
      0.588
VAP27-1
Vesicle associated protein; Part of a membrane-cytoskeletal adapter complex that forms a bridge between the endoplasmic reticulum and the plasma membrane. Associates with microtubules (256 aa)
       
      0.588
AT2G25520
Drug/metabolite transporter superfamily protein (347 aa)
       
      0.588
AT1G27300
Uncharacterized protein (200 aa)
       
      0.588
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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