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AT1G21925 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G21925" - Encodes a Plant thionin family protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G21925Encodes a Plant thionin family protein (100 aa)    
Predicted Functional Partners:
AT3G29785
Pol-like polyprotein/retrotransposon; Unknown protein; Has 90 Blast hits to 90 proteins in 7 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (109 aa)
     
        0.598
AT4G03728
Unknown protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in cellular_component unknown; Has 6 Blast hits to 6 proteins in 2 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (141 aa)
     
        0.469
AT4G08270
Glutathione S-transferase T3-like protein; BEST Arabidopsis thaliana protein match is- DNA binding (TAIR-AT3G47680.1); Has 29 Blast hits to 29 proteins in 3 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (99 aa)
     
        0.463
AT1G47680
Unknown protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G47700.1); Has 3 Blast hits to 3 proteins in 1 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (104 aa)
     
        0.457
AT1G43415
Unknown protein; Has 1 Blast hits to 1 proteins in 1 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (117 aa)
     
        0.457
AT1G43330
Homeodomain-like superfamily protein; Contains the following InterPro domains- Homeodomain-like (InterPro-IPR009057), Myb transcription factor (InterPro-IPR015495); BEST Arabidopsis thaliana protein match is- myb domain protein 3r2 (TAIR-AT4G00540.2); Has 697 Blast hits to 693 proteins in 153 species- Archae - 0; Bacteria - 0; Metazoa - 374; Fungi - 20; Plants - 154; Viruses - 3; Other Eukaryotes - 146 (source- NCBI BLink) (118 aa)
     
        0.447
AT1G43320
Unknown protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Has 6 Blast hits to 4 proteins in 2 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (118 aa)
     
        0.446
AT2G07200
Cysteine proteinases superfamily protein; Its function is described as cysteine-type peptidase activity; Involved in proteolysis; Located in cellular_component unknown; Contains the following InterPro domains- Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro-IPR003653); Has 37 Blast hits to 37 proteins in 3 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (151 aa)
     
        0.445
AT1G21928
Encodes a Plant thionin family protein (100 aa)
     
     
0.445
AT5G35230
Unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (366 aa)
     
        0.440
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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