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AT1G22040 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G22040" - F-box/kelch-repeat protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G22040F-box/kelch-repeat protein (475 aa)    
Predicted Functional Partners:
AT1G27430
GYF domain-containing protein (1492 aa)
     
   
  0.962
AT2G40480
Uncharacterized protein (518 aa)
           
  0.960
AT1G08360
60S ribosomal protein L10a-1 (216 aa)
           
  0.879
AT3G25470
Putative hemolysin (301 aa)
           
  0.865
ATMAP65-6
Microtubule-associated protein 6; Microtubule-associated protein that mediates the formation of a mesh-like stable and dense network formed by individual microtubules (MT). Confers MT resistance to high concentration of NaCl (608 aa)
     
   
  0.861
AT1G30960
GTP-binding protein ERG; Has a crucial role in plant growth and development, possibly by influencing mitochondrial division (437 aa)
           
  0.772
WRKY72
WRKY DNA-binding protein 72; Transcription factor. Interacts specifically with the W box (5’-(T)TGAC[CT]-3’), a frequently occurring elicitor- responsive cis-acting element (By similarity) (548 aa)
           
  0.675
UBC2
Ubiquiting-conjugating enzyme 2; Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins (152 aa)
       
 
  0.558
QUA1
QUASIMODO 1; Alpha-1-4-D-galacturonosyltransferase involved in homogalacturonan (HGA) synthesis, a class of pectin which plays a role in cell adhesion (559 aa)
           
  0.491
EYE
EMBRYO YELLOW (836 aa)
     
   
  0.411
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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