STRINGSTRING
AT1G22110 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G22110" - Structural constituent of ribosome in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G22110Structural constituent of ribosome (282 aa)    
Predicted Functional Partners:
AT5G20810
SAUR-like auxin-responsive protein (190 aa)
     
        0.438
AT5G09210
GC-rich sequence DNA-binding factor-like protein (603 aa)
     
        0.438
AT5G07260
START lipid-binding domain-containing protein (541 aa)
     
        0.438
GA20OX3
Gibberellin 20 oxidase 3; Key oxidase enzyme in the biosynthesis of gibberellin that catalyzes the conversion of GA12 and GA53 to GA9 and GA20 respectively, via a three-step oxidation at C-20 of the GA skeleton. GA53 is less effectively oxidized than GA12, and GA25 is also formed as a minor product (380 aa)
     
        0.438
AT3G47410
Uncharacterized protein (221 aa)
     
        0.438
TBL22
TRICHOME BIREFRINGENCE-LIKE 22; Involved in xyloglucan specific O-acetylation in seeds (414 aa)
     
        0.438
MYB118
Myb domain protein 118 (437 aa)
     
        0.438
AT3G11180
Leucoanthocyanidin dioxygenase-like protein (403 aa)
     
        0.438
AT3G02590
Delta(7)-sterol-C5(6)-desaturase (279 aa)
     
        0.438
AT2G15440
Uncharacterized protein (329 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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