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STRINGSTRING
AT1G22160 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G22160" - Protein of unknown function in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G22160Protein of unknown function (DUF581); Contains the following InterPro domains- Protein of unknown function DUF581 (InterPro-IPR007650); BEST Arabidopsis thaliana protein match is- Protein of unknown function (DUF581) (TAIR-AT1G78020.1); Has 511 Blast hits to 511 proteins in 19 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 511; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (147 aa)    
Predicted Functional Partners:
CYP705A19
Cytochrome P450, family 705, subfamily A, polypeptide 19; Member of CYP705A; Belongs to the cytochrome P450 family (513 aa)
           
  0.952
AT3G28500
60S acidic ribosomal protein family; Plays an important role in the elongation step of protein synthesis (115 aa)
           
  0.909
AT4G23680
Polyketide cyclase/dehydrase and lipid transport superfamily protein; Its function is described as molecular_function unknown; Involved in response to biotic stimulus, defense response; Located in cellular_component unknown; Expressed in 19 plant structures; Expressed during 9 growth stages; Contains the following InterPro domains- Bet v I allergen (InterPro-IPR000916); BEST Arabidopsis thaliana protein match is- Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR-AT4G23670.1); Has 354 Blast hits to 327 proteins in 40 species- Archae - 0; Bacteria - 0; Metazoa - [...] (151 aa)
           
  0.908
AT3G53310
AP2/B3-like transcriptional factor family protein; Its function is described as DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, DNA-dependent; Located in endomembrane system; Expressed in 15 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Transcriptional factor B3 (InterPro-IPR003340); BEST Arabidopsis thaliana protein match is- AP2/B3-like transcriptional factor family protein (TAIR-AT3G06160.2); Has 6284 Blast hits to 2802 proteins in 274 species- Archae - 3; Bacteria - 16 [...] (286 aa)
     
   
  0.862
CSLE1
Cellulose synthase-like protein E1; Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall (729 aa)
           
  0.696
NRT1.7
Protein NRT1/ PTR FAMILY 2.13; Low-affinity proton-dependent nitrate transporter. Not involved in dipeptides transport, but has a weak glucosinolate transport activity. Involved in phloem loading and nitrate remobilization from the older leaves to other tissues; Belongs to the PTR2/POT transporter (TC 2.A.17) family (620 aa)
           
  0.642
SPL4
Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3’UTR (174 aa)
     
   
  0.559
AT3G27200
Cupredoxin superfamily protein; Its function is described as electron carrier activity, copper ion binding; Located in anchored to membrane; Expressed in 22 plant structures; Expressed during 12 growth stages; Contains the following InterPro domains- Plastocyanin-like (InterPro-IPR003245), Cupredoxin (InterPro-IPR008972); BEST Arabidopsis thaliana protein match is- uclacyanin 1 (TAIR-AT2G32300.1); Has 1603 Blast hits to 1540 proteins in 96 species- Archae - 0; Bacteria - 21; Metazoa - 19; Fungi - 24; Plants - 1498; Viruses - 0; Other Eukaryotes - 41 (source- NCBI BLink) (174 aa)
           
  0.553
AT3G05165
Major facilitator superfamily protein; Sugar transporter (467 aa)
           
  0.530
KIN10
SNF1-related protein kinase catalytic subunit alpha KIN10; Catalytic subunit of the probable trimeric SNF1-related protein kinase (SnRK) complex, which may play a role in a signal transduction cascade regulating gene expression and carbohydrate metabolism in higher plants. The SnRK complex may also be involved in the regulation of fatty acid synthesis by phosphorylation of acetyl-CoA carboxylase and in assimilation of nitrogen by phosphorylating nitrate reductase. In vitro, KIN10 exhibits kinase activity on sucrose phosphate synthase and the kinase activity is inhibited by PRL1. May be [...] (535 aa)
       
      0.522
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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