STRINGSTRING
AT1G22160 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G22160" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G22160Uncharacterized protein (147 aa)    
Predicted Functional Partners:
AT5G02230
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (280 aa)
     
   
  0.663
AT1G76960
Uncharacterized protein (52 aa)
           
  0.638
AT1G19000
Myb family transcription factor (285 aa)
           
  0.636
AT3G62960
glutaredoxin-C14; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity) (102 aa)
     
   
  0.621
AT3G01800
Ribosome recycling factor (267 aa)
           
  0.608
BOR5
HCO3- transporter family; Putative boron transporter. Boron is essential for maintaining the integrity of plants cell walls (By similarity) (683 aa)
           
  0.559
AT5G02580
Uncharacterized protein (91 aa)
           
  0.557
AT2G22590
UDP-glycosyltransferase-like protein (470 aa)
           
  0.556
AT5G19440
Rossmann-fold NAD(P)-binding domain-containing protein (326 aa)
           
  0.503
AT2G23910
NAD(P)-binding Rossmann-fold superfamily protein (304 aa)
           
  0.471
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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