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AT1G22200 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G22200" - Endoplasmic reticulum vesicle transporter protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
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gene co-occurrence
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textmining
co-expression
protein homology
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AT1G22200Endoplasmic reticulum vesicle transporter protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endoplasmic reticulum; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Protein of unknown function DUF1692 (InterPro-IPR012936); BEST Arabidopsis thaliana protein match is- Endoplasmic reticulum vesicle transporter protein (TAIR-AT1G36050.2); Has 1257 Blast hits to 1087 proteins in 204 species- Archae - 0; Bacteria - 0; Metazoa - 432; Fungi - 284; Plants - 278; Viruses [...] (386 aa)    
Predicted Functional Partners:
AT5G50110
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Its function is described as rRNA methyltransferase activity; Involved in rRNA processing; Located in cytoplasm; Expressed in 24 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- rRNA small subunit methyltransferase G (InterPro-IPR003682); Has 6840 Blast hits to 6840 proteins in 2435 species- Archae - 0; Bacteria - 5096; Metazoa - 2; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 1704 (source- NCBI BLink) (292 aa)
   
   
  0.925
AT5G39960
GTP binding;GTP binding; Its function is described as GTP binding; Located in intracellular; Expressed in 21 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- GTP-binding, EngA (InterPro-IPR016484), Small GTP-binding protein (InterPro-IPR005225), GTP1/OBG (InterPro-IPR006073), Guanylate kinase (InterPro-IPR008144), GTP-binding protein, HSR1-related (InterPro-IPR002917); BEST Arabidopsis thaliana protein match is- GTP-binding family protein (TAIR-AT3G12080.1); Has 25797 Blast hits to 22413 proteins in 2944 species- Archae - 203; Bacteria - 192 [...] (621 aa)
   
 
  0.814
emb2738
GTP-binding family protein; Embryo defective 2738 (emb2738); Its function is described as GTP binding; Involved in embryo development ending in seed dormancy; Located in chloroplast; Expressed in 21 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- GTP-binding, EngA (InterPro-IPR016484), Small GTP-binding protein (InterPro-IPR005225), GTP1/OBG (InterPro-IPR006073), GTP-binding protein, HSR1-related (InterPro-IPR002917); BEST Arabidopsis thaliana protein match is- GTP binding;GTP binding (TAIR-AT5G39960.1); Has 46668 Blast hits to 25884 protei [...] (663 aa)
   
 
  0.814
AT1G78010
tRNA modification GTPase, putative; Its function is described as GTP binding, GTPase activity; Involved in small GTPase mediated signal transduction, tRNA modification; Located in intracellular; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Small GTP-binding protein (InterPro-IPR005225), Ras GTPase (InterPro-IPR001806), tRNA modification GTPase TrmE (InterPro-IPR004520), GTP-binding protein TrmE, N-terminal (InterPro-IPR018948), GTP-binding protein, HSR1-related (InterPro-IPR002917); BEST Arabidopsis thaliana protein match [...] (560 aa)
   
 
  0.814
PDIL1-5
Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin) (537 aa)
     
 
  0.638
PDIL5-1
Protein disulfide-isomerase 5-1; Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds (146 aa)
     
 
  0.624
AT1G51310
transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases; Its function is described as tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity, transferase activity; Involved in tRNA processing, RNA processing; Located in chloroplast, cytoplasm; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Rossmann-like alpha/beta/alpha sandwich fold (InterPro-IPR014729), tRNA-specific 2-thiouridylase (InterPro-IPR004506); Has 8544 Blast hits to 8538 proteins in 2600 species- Archae - 0; Bacteria - 5626; Me [...] (497 aa)
   
 
  0.558
PDXH
Pyridoxine/pyridoxamine 5’-phosphate oxidase 1, chloroplastic; Catalyzes the oxidation of either pyridoxine 5’- phosphate (PNP) or pyridoxamine 5’-phosphate (PMP) into pyridoxal 5’-phosphate (PLP). Involved in the PLP salvage pathway. Has a higher preference for PNP over PMP. May also catalyze the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; In the N-terminal section; belongs to th [...] (530 aa)
   
   
  0.543
PDIL1-2
Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response (508 aa)
     
 
  0.540
P5CS2
Delta-1-pyrroline-5-carboxylate synthase B; Encodes delta 1-pyrroline-5-carboxylate synthetase B. Gene expression is induced by dehydration, high salt and ABA. Knock-out mutations in P5CS2 are embryo-lethal. P5CS2 appears to be present in different cells and/or different subcellular locations from P5CS1 in a tissue-dependent manner; In the N-terminal section; belongs to the glutamate 5- kinase family (726 aa)
           
  0.538
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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