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AUF2 protein (Arabidopsis thaliana) - STRING interaction network
"AUF2" - F-box protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AUF2F-box protein (314 aa)    
Predicted Functional Partners:
PHIP1
Phragmoplastin interacting protein 1 (597 aa)
           
  0.841
RPT1A
Regulatory particle triple-A 1A; The 26S protease is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex (426 aa)
           
  0.602
RAN2
GTP-binding nuclear protein Ran-2; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity) (221 aa)
           
  0.560
AT4G29650
Cytidine deaminase 4 (251 aa)
           
  0.560
AT3G13310
Chaperone DnaJ-domain containing protein (157 aa)
     
        0.472
LBD41
LOB domain-containing protein 41 (263 aa)
     
        0.472
SUS4
Sucrose synthase 4; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways (808 aa)
     
        0.463
ADH1
Alcohol dehydrogenase 1; Alcohol dehydrogenase mostly active on ethanol (EtOH), but exhibits broad substrates selectivity for primary and secondary alcohols (e.g. butanol, propyl alcohol, pentanol, isopentanol, ethylene glycol, isopropanol, methanol and tertiary butyl alcohol) (PubMed-23707506). Converts allyl alcohol to highly toxic acryl-aldehyde (PubMed-20508152). Required for survival and acclimation in hypoxic conditions, especially in roots (PubMed-12857811, PubMed-9880346) (379 aa)
     
        0.443
AT4G15150
Glycine-rich protein (102 aa)
     
        0.438
AT4G33070
Pyruvate decarboxylase; May play a role in ethanolic fermentation during anoxia (607 aa)
     
        0.437
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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