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AT1G22330 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G22330" - RNA recognition motif-containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G22330RNA recognition motif-containing protein (291 aa)    
Predicted Functional Partners:
BZIP61
Basic leucine zipper transcription factor-like protein; Transcriptional activator (329 aa)
     
        0.824
AT5G19960
RNA recognition motif-containing protein (337 aa)
   
          0.502
AT1G01080
RNA recognition motif-containing protein (294 aa)
   
          0.502
PSRP2
RNA recognition motif-containing protein (253 aa)
   
          0.501
AT2G35410
RNA-binding (RRM/RBD/RNP motifs) family protein (308 aa)
   
          0.496
AT3G10400
U11/U12-31K; RNA chaperone required for proper U12 intron splicing and for normal growth and development of plants. Mainly responsible for meristem activity. Plays a role in regulating cell division (261 aa)
   
          0.464
AT3G07010
Putative pectate lyase 8 (416 aa)
     
        0.441
AT5G19030
RNA recognition motif-containing protein (172 aa)
   
          0.421
AT3G06770
Polygalacturonase-like protein (446 aa)
     
        0.416
AT1G78260
RNA recognition motif-containing protein (287 aa)
   
     
0.402
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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