• Version:
  • 11.0 (preview - - version 10.5 still available here)
PATL2 protein (Arabidopsis thaliana) - STRING interaction network
"PATL2" - PATELLIN 2 in Arabidopsis thaliana
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
protein homology
Your Input:
Gene Fusion
PATL2PATELLIN 2; Carrier protein that may be involved in membrane- trafficking events associated with cell plate formation during cytokinesis. Binds to some hydrophobic molecules such as phosphoinositides and promotes their transfer between the different cellular sites (By similarity); Belongs to the patellin family (683 aa)    
Predicted Functional Partners:
Leucine-rich repeat protein kinase family protein; Its function is described as protein serine/threonine kinase activity, kinase activity, ATP binding; Involved in transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; Located in anchored to plasma membrane, cell wall, plasma membrane, membrane, plant-type cell wall; Expressed in 25 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Protein kinase, catalytic domain (InterPro-IPR000719), Serine/threonine-protein kinase domain (InterPro-IPR002290), [...] (627 aa)
Type IV inositol polyphosphate 5-phosphatase 3; Has phosphatase activity toward PtdIns(4,5)P2 and PtdIns(3,4,5)P3; Belongs to the inositol polyphosphate 5-phosphatase family (664 aa)
Uncharacterized protein At2g30930; Unknown protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in chloroplast, plasma membrane, membrane; Expressed in 24 plant structures; Expressed during 14 growth stages; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G06540.1); Has 194 Blast hits to 176 proteins in 78 species- Archae - 0; Bacteria - 101; Metazoa - 15; Fungi - 25; Plants - 12; Viruses - 4; Other Eukaryotes - 37 (source- NCBI BLink) (164 aa)
DNA/RNA-binding protein Kin17, conserved region; May act as repressor of root growth during copper excess and of hypocotyl growth in the dark (347 aa)
Guanosine nucleotide diphosphate dissociation inhibitor 2; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP (444 aa)
Probable purine permease 18; Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane (390 aa)
Subtilisin-like protease SBT3.1; Subtilase family protein; Its function is described as identical protein binding, serine-type endopeptidase activity; Involved in proteolysis, pollen tube growth; Located in endomembrane system; Expressed in pollen tube; Expressed during M germinated pollen stage; Contains the following InterPro domains- Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro-IPR000209), Proteinase inhibitor I9, subtilisin propeptide (InterPro-IPR010259), Peptidase S8/S53, subtilisin, active site (InterPro-IPR022398), Peptidase S8, subtilisin-related (InterPro-IPR015500) [...] (803 aa)
Plasma membrane-associated cation-binding protein 1; May be involved in intracellular signaling through interaction with PtdInsPs and calmodulin (CaM); may keep PtdInsPs attached to the plasma membrane until Ca(2+)-CaM reaches a competitive concentration subsequent to an increase triggered by a stimulus, thus leading to PtdInsPs release and subsequent activation of InsPs-dependent signaling cascade. Interacts competitively at the N-terminus with calcium ions and CaM (in a calcium-dependent manner), and with the phosphatidylinositol phosphates PtdIns(3,4,5)P(3), PtdIns(3,4)P(2), PtdIns( [...] (226 aa)
Encodes a nitrile-specifier protein NSP3. NSP3 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation (467 aa)
RING/U-box superfamily protein; Component of the SCF (SKP1-CUL1-F-box protein) E3 ubiquitin ligase complex, which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. The SCF complex plays a crucial role in regulating response to auxin and is essential for growth and development. Through the RING-type zinc finger, seems to recruit the E2 ubiquitination enzyme, to the complex and brings it into close proximity to the substrate (By similarity); Belongs to the RING-box family (115 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (9%) [HD]