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STRINGSTRING
AGL87 protein (Arabidopsis thaliana) - STRING interaction network
"AGL87" - MADS-box protein AGL87 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AGL87MADS-box protein AGL87; AGAMOUS-like 87 (AGL87); Its function is described as sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription; Located in nucleus; Expressed in 19 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Transcription factor, MADS-box (InterPro-IPR002100); BEST Arabidopsis thaliana protein match is- MADS-box transcription factor family protein (TAIR-AT3G05860.2); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plan [...] (163 aa)    
Predicted Functional Partners:
AGL77
Uncharacterized protein At5g38740; AGAMOUS-like 77 (AGL77); Its function is described as sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, DNA-dependent; Located in nucleus; Expressed in central cell, antipodal cell; Contains the following InterPro domains- Transcription factor, MADS-box (InterPro-IPR002100); BEST Arabidopsis thaliana protein match is- AGAMOUS-like 81 (TAIR-AT5G39750.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryote [...] (426 aa)
           
  0.902
AGL91
SRF-type transcription factor; AGAMOUS-like 91 (AGL91); Its function is described as sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, DNA-dependent; Located in nucleus; Expressed in endosperm; Contains the following InterPro domains- Transcription factor, MADS-box (InterPro-IPR002100); BEST Arabidopsis thaliana protein match is- AGAMOUS-like 29 (TAIR-AT2G34440.1); Has 5776 Blast hits to 5776 proteins in 666 species- Archae - 0; Bacteria - 0; Metazoa - 621; Fungi - 305; Plants - 4780; Viruses - 0; Other Eukaryotes - 70 (source- NCBI BLink) (178 aa)
           
  0.770
CSLA14
Probable mannan synthase 14; Probable mannan synthase which consists of a 4-beta- mannosyltransferase activity on mannan using GDP-mannose. The beta-1,4-mannan product is the backbone for galactomannan synthesis by galactomannan galactosyltransferase. Galactomannan is a noncellulosic polysaccharides of plant cell wall (By similarity). Required for synthesis of a cell wall polysaccharide (535 aa)
           
  0.739
VDD
B3 domain-containing protein At5g18000; Encodes VERDANDI (VDD), a putative transcription factor belonging to the reproductive meristem (REM) family. VDD is a direct target of the MADS domain ovule identity complex. Mutation in VDD affects embryo sac differentiation (307 aa)
           
  0.641
AT4G38900
Basic-leucine zipper (bZIP) transcription factor family protein; Its function is described as DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, DNA-dependent; Expressed in 24 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Basic-leucine zipper (bZIP) transcription factor (InterPro-IPR004827), bZIP transcription factor, bZIP-1 (InterPro-IPR011616); BEST Arabidopsis thaliana protein match is- Basic-leucine zipper (bZIP) transcription factor family protein (TAIR-AT2G21230.1); Has [...] (553 aa)
           
  0.627
AT3G45260
Protein indeterminate-domain 9; Probable transcription factor (446 aa)
       
 
  0.579
AT5G07160
Basic-leucine zipper (bZIP) transcription factor family protein; Its function is described as DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, DNA-dependent; Contains the following InterPro domains- Basic-leucine zipper (bZIP) transcription factor (InterPro-IPR004827), bZIP transcription factor, bZIP-1 (InterPro-IPR011616); BEST Arabidopsis thaliana protein match is- Basic-leucine zipper (bZIP) transcription factor family protein (TAIR-AT3G58120.1); Has 573 Blast hits to 573 proteins in 55 species- Archae - 0; Bacteria - [...] (150 aa)
           
  0.567
VIP1
VIRE2-interacting protein 1; Transcription activator that binds specifically to the VIP1 response elements (VREs) DNA sequence 5’-ACNGCT-3’ found in some stress genes (e.g. TRX8 and MYB44), when phosphorylated/activated by MPK3. Required for Agrobacterium VirE2 nuclear import and tumorigenicity. Promotes transient expression of T-DNA in early stages by interacting with VirE2 in complex with the T-DNA and facilitating its translocation to the nucleus, and mediates stable genetic transformation by Agrobacterium by binding H2A histone. Prevents cell differentiation and shoot formation. Li [...] (341 aa)
           
  0.555
AT1G58110
Basic-leucine zipper (bZIP) transcription factor family protein; Its function is described as sequence-specific DNA binding, protein dimerization activity, DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, DNA-dependent; Located in cellular_component unknown; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Basic-leucine zipper (bZIP) transcription factor (InterPro-IPR004827), bZIP transcription factor, bZIP-1 (InterPro-IPR011616); BEST Arabidopsis thaliana prot [...] (374 aa)
           
  0.550
AT1G53885
Linoleate 9S-lipoxygenase-4 protein, putative (DUF581); Protein of unknown function (DUF581); Contains the following InterPro domains- Protein of unknown function DUF581 (InterPro-IPR007650); BEST Arabidopsis thaliana protein match is- Protein of unknown function (DUF581) (TAIR-AT1G53885.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (126 aa)
           
  0.533
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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