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AT1G22600 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G22600" - Late embryogenesis abundant protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
protein homology
Your Input:
Gene Fusion
AT1G22600Late embryogenesis abundant protein (LEA) family protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Expressed in stem, embryo, sperm cell, hypocotyl, flower; Expressed during petal differentiation and expansion stage, D bilateral stage; BEST Arabidopsis thaliana protein match is- late embryogenesis abundant domain-containing protein / LEA domain-containing protein (TAIR-AT1G72100.1); Has 169 Blast hits to 166 proteins in 40 species- Archae - 0; Bacteria - 0; Metazoa - 72; Fungi - 8; Plants - 85; Viru [...] (385 aa)    
Predicted Functional Partners:
Late embryogenesis abundant protein-related / LEA protein-related; Has 75 Blast hits to 75 proteins in 15 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (114 aa)
Stress-responsive protein (KIN1) / stress-induced protein (KIN1); Cold and ABA inducible protein kin1, possibly functions as an anti-freeze protein. Transcript level of this gene is induced by cold, ABA, dehydration and osmoticum (mannitol). However, protein activity of GUS fused to the promoter of this gene is inhibited by cold treatment, suggesting an inhibition of the protein by increased transcript level (66 aa)
Probable desiccation-related protein LEA14; Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against dessication; Belongs to the LEA type 2 family (151 aa)
Heat stress transcription factor A-9; Seed-specific transcriptional regulator that specifically binds DNA sequence 5’-AGAAnnTTCT-3’ known as heat shock promoter elements (HSE). Seems to be specialized for the developmental expression of heat shock protein (HSP) genes during seed maturation. Activated by ABI3; Belongs to the HSF family. Class A subfamily (331 aa)
Dehydrin family protein; Encodes a gene induced by low temperature and dehydration. Inhibits e.coli growth while overexpressed. Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. LTI29 and LTI30 double overexpressors confer cold tolerance. Localized to membranes and cytoplasm (260 aa)
Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial; Mediates tolerance to oxidative stresses (e.g. hydrogen peroxide H(2)O(2), diamide, menadione and tert-butyl hydroperoxide) by minimizing the negative effects of oxidation and monitoring photosynthesis during stress. Promotes root development. Prevents premature aging (e.g. senescence and flowering). Involved in resistance against compatible pathogens such as Botrytis cinerea and Pseudomonas syringae pv. tomato (97 aa)
Chaperone DnaJ-domain superfamily protein; Have a continuous role in plant development probably in the structural organization of compartments (161 aa)
Chaperone DnaJ-domain superfamily protein; Its function is described as heat shock protein binding; Involved in protein folding; Located in chloroplast; Expressed in 18 plant structures; Expressed during 11 growth stages; Contains the following InterPro domains- Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro-IPR015609), Heat shock protein DnaJ, N-terminal (InterPro-IPR001623); BEST Arabidopsis thaliana protein match is- Chaperone DnaJ-domain superfamily protein (TAIR-AT4G36040.1); Has 19677 Blast hits to 19677 proteins in 3133 species- Archae - 135; Bacteria - 8632; Met [...] (160 aa)
Chaperone DnaJ-domain superfamily protein; Have a continuous role in plant development probably in the structural organization of compartments (163 aa)
Late embryogenesis abundant protein 31; LEA proteins are late embryonic proteins abundant in higher plant seed embryos. The function of those proteins is not known (Probable). Promotes germination rate. Enhances cation toxicity (e.g. lithium ion) and osmotic stress (e.g. NaCl and sorbitol) tolerance during germination and in seedlings (262 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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