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AT1G22660 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G22660" - Polynucleotide adenylyltransferase family protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G22660Polynucleotide adenylyltransferase family protein; Its function is described as tRNA adenylyltransferase activity, RNA binding, nucleotidyltransferase activity; Involved in tRNA processing, RNA processing; Located in mitochondrion; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Poly A polymerase, head domain (InterPro-IPR002646); BEST Arabidopsis thaliana protein match is- Polynucleotide adenylyltransferase family protein (TAIR-AT2G17580.1); Has 8643 Blast hits to 8635 proteins in 2546 species- Archae - 2; Bacteria - 6091; [...] (605 aa)    
Predicted Functional Partners:
EMB2768
Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction- tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family (511 aa)
   
   
  0.640
RNEE/G
Ribonuclease E/G-like protein, chloroplastic; Involved in intercistronic processing of primary transcripts from chloroplast operons. The endonucleolytic activity of the enzyme depends on the number of phosphates at the 5’ end, is inhibited by structured RNA, and preferentially cleaves A/U- rich sequences; Belongs to the RNase E/G family (1001 aa)
     
 
  0.624
TRZ3
tRNase Z TRZ3, mitochondrial; Zinc phosphodiesterase, which displays tRNA 3’- processing endonuclease activity. Involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA. Can process the mitochondrial tRNA-like structures (t-elements). Involved in the processing of small nucleolar RNAs (snoRNAs) (890 aa)
   
   
  0.610
TRZ4
tRNAse Z TRZ4, mitochondrial; Zinc phosphodiesterase, which displays tRNA 3’- processing endonuclease activity. Involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA. Can process the mitochondrial tRNA-like structures (t-elements) (942 aa)
   
   
  0.595
AT3G58140
Phenylalanine--tRNA ligase, chloroplastic/mitochondrial; Is responsible for the charging of tRNA(Phe) with phenylalanine in mitochondrial translation; Belongs to the class-II aminoacyl-tRNA synthetase family (429 aa)
   
   
  0.591
PSD
ARM repeat superfamily protein; Encodes a karyopherin, specifically the Arabidopsis ortholog of LOS1/XPOT, a protein that mediates nuclear export of tRNAs in yeast and mammals. PSD is capable of rescuing the tRNA export defect of los1 in S. cerevisiae. psd mutants display disrupted initiation of the shoot apical meristem and delay leaf initiation after germination; they also display delayed transition from vegetative to reproductive development; Belongs to the exportin family (988 aa)
     
 
  0.571
AT5G63490
CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Octicosapeptide/Phox/Bem1p (InterPro-IPR000270), Cystathionine beta-synthase, core (InterPro-IPR000644); BEST Arabidopsis thaliana protein match is- CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein (TAIR-AT5G50530.1); Has 8040 Blast hits to 6478 proteins in 1504 species- Archae - 1004; Bacteria - 5599; Metazoa - 7; Fungi - 119; Plants - 199; Viruses - 0; Other Eukaryotes - 1112 (source- NCBI BLink) (543 aa)
         
  0.570
AT5G50530
CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein; Located in chloroplast; Expressed in cultured cell; Contains the following InterPro domains- Octicosapeptide/Phox/Bem1p (InterPro-IPR000270), Cystathionine beta-synthase, core (InterPro-IPR000644); BEST Arabidopsis thaliana protein match is- CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein (TAIR-AT5G50530.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (548 aa)
         
  0.570
CBSCBSPB4
CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein; Located in chloroplast; Expressed in male gametophyte, cultured cell, pollen tube; Expressed during M germinated pollen stage; Contains the following InterPro domains- Octicosapeptide/Phox/Bem1p (InterPro-IPR000270), Cystathionine beta-synthase, core (InterPro-IPR000644); BEST Arabidopsis thaliana protein match is- CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein (TAIR-AT5G50640.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants [...] (548 aa)
         
  0.570
AT3G52950
CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein; Located in chloroplast; Expressed in 23 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Octicosapeptide/Phox/Bem1p (InterPro-IPR000270), Cystathionine beta-synthase, core (InterPro-IPR000644); BEST Arabidopsis thaliana protein match is- CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein (TAIR-AT2G36500.1); Has 6963 Blast hits to 5172 proteins in 1360 species- Archae - 807; Bacteria - 5016; Metazoa - 6; Fungi - 130; Plants - 259; Viruses - 0; Other Eukaryotes - [...] (556 aa)
         
  0.570
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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