STRINGSTRING
AT1G23050 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G23050" - Hydroxyproline-rich glycoprotein family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G23050Hydroxyproline-rich glycoprotein family protein (161 aa)    
Predicted Functional Partners:
AT4G28240
Wound-responsive family protein (86 aa)
     
        0.442
AT1G67910
Uncharacterized protein (91 aa)
     
        0.438
AT4G12690
Uncharacterized protein (285 aa)
     
        0.436
AT3G13404
Uncharacterized protein (21 aa)
     
        0.436
AT5G02440
Uncharacterized protein (176 aa)
     
        0.435
SYP23
Syntaxin-23; May function in the docking or fusion of transport vesicles with the prevacuolar membrane (262 aa)
     
        0.435
TIP2
Aquaporin TIP1-2; Water channel required to facilitate the transport of water across cell membrane. May be involved in the osmoregulation in plants under high osmotic stress such as under a high salt condition. Transports urea in yeast cells in a pH-independent manner. Transports H(2)O(2) in yeast cells (253 aa)
     
        0.435
AT2G05540
Glycine-rich protein (135 aa)
     
        0.435
AT1G26665
Mediator complex, subunit Med10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (189 aa)
     
        0.435
AT1G71970
Uncharacterized protein (225 aa)
     
        0.434
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (14%) [HD]