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STRINGSTRING
AT1G23110 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G23110" - Unknown protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G23110Unknown protein; Its function is described as molecular_function unknown; Located in chloroplast; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G70900.1); Has 59 Blast hits to 59 proteins in 15 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (248 aa)    
Predicted Functional Partners:
SQD2
Sulfoquinovosyl transferase SQD2; Catalyzes the transfer of the sulfoquinovose moiety from UDP-sulfoquinovose to diacylglycerol during sulfolipid biosynthesis. Sulfolipid contributes to maintaining a negatively charged lipid-water interface, a requirement for proper function of photosynthetic membranes. Sulfolipid may also function as a substitute of anionic phospholipids under phosphate-limited growth conditions (510 aa)
     
   
  0.664
AT4G23000
Calcineurin-like metallo-phosphoesterase superfamily protein; Its function is described as hydrolase activity, protein serine/threonine phosphatase activity; Involved in biological_process unknown; Located in cellular_component unknown; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Metallophosphoesterase (InterPro-IPR004843); BEST Arabidopsis thaliana protein match is- Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR-AT4G11800.1); Has 177 Blast hits to 132 proteins in 49 species- Archae - 0; Bacteria - 98 [...] (1015 aa)
     
   
  0.591
SIS
E3 ubiquitin-protein ligase RLIM-like protein; Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich) (149 aa)
           
  0.533
AT4G11800
Calcineurin-like metallo-phosphoesterase superfamily protein; Its function is described as hydrolase activity, protein serine/threonine phosphatase activity; Involved in biological_process unknown; Located in endoplasmic reticulum; Expressed in 25 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Metallophosphoesterase (InterPro-IPR004843); BEST Arabidopsis thaliana protein match is- Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR-AT4G23000.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1 [...] (1013 aa)
           
  0.533
AT3G55646
TPRXL; Unknown protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in chloroplast; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT2G39855.2); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (146 aa)
           
  0.533
AT1G49560
Homeodomain-like superfamily protein; Probable transcription factor involved in phosphate signaling in roots (333 aa)
           
  0.533
AT5G23370
GRAM domain-containing protein / ABA-responsive protein-related; Contains the following InterPro domains- GRAM (InterPro-IPR004182); BEST Arabidopsis thaliana protein match is- GRAM domain-containing protein / ABA-responsive protein-related (TAIR-AT5G23350.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink); Belongs to the GEM family (219 aa)
           
  0.444
AT5G23360
GRAM domain-containing protein / ABA-responsive protein-related; Contains the following InterPro domains- GRAM (InterPro-IPR004182); BEST Arabidopsis thaliana protein match is- GRAM domain-containing protein / ABA-responsive protein-related (TAIR-AT5G23350.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink); Belongs to the GEM family (210 aa)
           
  0.444
AT5G23350
GRAM domain-containing protein / ABA-responsive protein-related; Contains the following InterPro domains- GRAM (InterPro-IPR004182); BEST Arabidopsis thaliana protein match is- GRAM domain-containing protein / ABA-responsive protein-related (TAIR-AT5G23370.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink); Belongs to the GEM family (280 aa)
           
  0.444
AT5G08350
GRAM domain-containing protein / ABA-responsive protein-related; Contains the following InterPro domains- GRAM (InterPro-IPR004182); BEST Arabidopsis thaliana protein match is- GRAM domain-containing protein / ABA-responsive protein-related (TAIR-AT5G23370.1); Has 358 Blast hits to 358 proteins in 24 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink); Belongs to the GEM family (222 aa)
           
  0.444
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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