STRINGSTRING
AT1G23130 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G23130" - Polyketide cyclase/dehydrase and lipid transport-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G23130Polyketide cyclase/dehydrase and lipid transport-like protein (160 aa)    
Predicted Functional Partners:
AT5G22460
alpha/beta-Hydrolases superfamily protein (340 aa)
           
  0.670
AT5G07030
Aspartyl protease family protein (455 aa)
           
  0.600
AT1G76450
PsbP domain-containing protein 3 (247 aa)
           
  0.600
AT1G73230
Nascent polypeptide-associated complex NAC (165 aa)
           
  0.559
PCS1
PROMOTION OF CELL SURVIVAL 1; Embryo-specific aspartic protease that limits programmed cell death during reproductive development. Possesses peptidase activity toward casein in vitro (453 aa)
           
  0.489
AT4G00780
TRAF-like family protein (299 aa)
     
        0.474
PPD2
Protein TIFY 4B; Regulates the arrest of dispersed meristematic cells during lamina development (315 aa)
           
  0.449
SCL30A
SC35-like splicing factor 30A; Involved in intron recognition and spliceosome assembly. Binds probably to multiple 5’-GAAG-3’ repeats found in its third intron, suggesting autoregulation of alternative splicing (PubMed-22913769). May be necessary for accurate splicing of the 3’ region of introns (262 aa)
           
  0.428
XTH3
Xyloglucan endotransglucosylase/hydrolase 3; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity) (290 aa)
           
  0.422
PROT2
Proline transporter 2; Proline transporter that mediates proline and glycine betaine transport. May be involved in the uptake of compatible solutes from the soil into the roots, or in retrieval of apoplastic amino acids delivered to the roots via the phloem. May be involved in delivery of proline to wounding sites. When expressed in a heterologous system (yeast), imports D- and L- proline, glycine betaine and GABA across the plasma membrane. Has the same affinity for D- and L-proline (439 aa)
           
  0.420
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (10%) [HD]