STRINGSTRING
AT1G23150 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G23150" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G23150Uncharacterized protein (141 aa)    
Predicted Functional Partners:
AT3G51330
Aspartyl protease family protein (529 aa)
           
  0.869
AT3G55580
Regulator of chromosome condensation (RCC1) family protein (488 aa)
           
  0.866
AT5G10760
Aspartyl protease family protein; Aspartyl protease involved in a homeostatic feedback mechanism regulating systemic immunity. Has only mild or no influence on local defenses. Acts downstream of salicylic acid to suppress systemic immunity (464 aa)
           
  0.675
UCP5
Uncoupling protein 5; PUMPS are mitochondrial transporter proteins that create proton leaks across the inner mitochondrial membrane, thus uncoupling oxidative phosphorylation. This leads to a decrease in the efficiency of oxidative phosphorylation and an increase in heat production. May be involved in protecting plant cells against oxidative stress damage. Recombinant PUMP5, reconstituted into liposomes, transports a wide range of dicarboxylic acids including malate, oxaloacetate and succinate as well as phosphate, sulfate and thiosulfate. However, it is unknown if these transports are [...] (313 aa)
           
  0.609
NF-YC1
Nuclear factor Y, subunit C1; Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (234 aa)
           
  0.559
HVA22E
HVA22 homologue E (116 aa)
           
  0.557
RAT5
Histone H2A; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. Required for the T-DNA integration step of plant transformation by Agrobacterium. May play an important role in illegitimate recombination (130 aa)
           
  0.473
HOS15
WD-40 repeat family protein (613 aa)
           
  0.447
AT5G62240
Cell cycle regulated microtubule associated protein (377 aa)
     
        0.438
AT5G54780
RabGAP/TBC domain-containing protein (432 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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