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AT1G23220 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G23220" - Dynein light chain type 1-like protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G23220Dynein light chain type 1-like protein (129 aa)    
Predicted Functional Partners:
ROPGEF11
RHO guanyl-nucleotide exchange factor 11; Guanine-nucleotide exchange factor (GEF) that acts as an activator of Rop (Rho of plants) GTPases by promoting the exchange of GDP for GTP. Functions as a light-signaling switch that functions in root growth and development through the activation of Rop in a phytochrome-dependent manner. May act as a negative regulator of phytochrome-mediated primary root development (607 aa)
           
  0.862
AT2G25910
3’-5’ exonuclease and KH-I domain-containing protein (342 aa)
       
 
  0.609
SOB3
SUPPRESSOR OF PHYB-4#3; Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs) (By similarity). Acts redundantly with AHL18, AHL22 and AHL27 in the regulation of flowering and regulation of the hypocotyl elongation (PubMed-19517252). Acts redundantly with AHL27/ESC to modulate hypocotyl growth inhibition in response to light (PubMed-18088311) (302 aa)
       
      0.557
TY1
Thioredoxin Y1; Thiol-disulfide oxidoreductase that poorly activates chloroplastic malate dehydrogenase (NADP-MDH) and fructose-1,6- bisphosphatase. Provides reducing equivalents for peroxiredoxin Q (172 aa)
           
  0.505
AT1G62820
Calcium-binding EF-hand family protein; Potential calcium sensor (148 aa)
     
   
  0.451
AT4G15420
Ubiquitin fusion degradation UFD1 family protein (561 aa)
           
  0.451
B73
Molybdopterin adenylyltransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released (670 aa)
       
 
  0.420
TUB3
Tubulin beta chain 3; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (450 aa)
     
 
  0.412
TUB2
Tubulin beta chain 2; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (450 aa)
     
 
  0.412
TUB4
Beta tubulin gene; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (444 aa)
     
 
  0.412
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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