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AT1G23220 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G23220" - Putative dynein light subunit lc6, flagellar outer arm in Arabidopsis thaliana
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second shell of interactors
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AT1G23220Putative dynein light subunit lc6, flagellar outer arm; Dynein light chain type 1 family protein; Its function is described as microtubule motor activity; Involved in microtubule-based process; Located in microtubule associated complex; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Dynein light chain, type 1/2 (InterPro-IPR001372); BEST Arabidopsis thaliana protein match is- Dynein light chain type 1 family protein (TAIR-AT5G20110.1); Has 1246 Blast hits to 1246 proteins in 225 species- Archae - 0; Bacteria - 0; Metazoa - [...] (129 aa)    
Predicted Functional Partners:
NAC082
NAC domain containing protein 82; Transcriptional regulator that binds specific DNA sequences on the promoter regions of target genes (489 aa)
           
  0.786
AT2G25910
3’-5’ exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein; Its function is described as 3’-5’ exonuclease activity, RNA binding, nucleic acid binding; Involved in nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; Located in intracellular; Expressed in 23 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- K Homology (InterPro-IPR004087), K Homology, type 1, subgroup (InterPro-IPR018111), K Homology, type 1 (InterPro-IPR004088), Polynucleotidyl transferase, ribonuclease [...] (342 aa)
     
 
  0.619
EXO70H7
A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree (634 aa)
           
  0.550
AT4G13990
Probable xyloglucan galactosyltransferase GT14; Functions in xyloglucan synthesis by adding side chains to the xylosylated glucan backbone. Involved in the galactosylation of hemicellulose xyloglucan (521 aa)
           
  0.526
RRP41L
3’-5’-exoribonuclease family protein; Non-catalytic component of the RNA exosome complex which has 3’->5’ exoribonuclease activity and participates in a multitude of cellular RNA processing, maturation and degradation events. In vitro, is a processive phosphorolytic exonuclease and requires a single-stranded poly(A) tail on the substrate RNA for its activity (By similarity). Plays an important role in seed germination and early seedling growth by mediating specific cytoplasmic mRNA decay of transcripts coding for the abscisic acid (ABA) biosynthetic enzymes NCED5 and NCED6, and the ABA [...] (256 aa)
           
  0.524
B73
Molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1); Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released; In the N-terminal section; belongs to the MoaB/Mog family (670 aa)
       
 
  0.473
FLU
Tetratricopeptide repeat (TPR)-like superfamily protein; Encodes a novel coiled-coil, TPR domain containing protein that is localized to the chloroplast membrane and is involved in chlorophyll biosynthesis. Mutants accumulate protochlorophyllide, an intermediate in the chlorophyll biosynthesis pathway, in dark and release singlet oxygen in plastids in a controlled and non-invasive manner upon a dark/light shift (317 aa)
           
  0.465
AT4G05090
Putative PAP-specific phosphatase, mitochondrial; Converts adenosine 3’-phosphate 5’-phosphosulfate (PAPS) to adenosine 5’-phosphosulfate (APS) and 3’(2’)-phosphoadenosine 5’- phosphate (PAP) to AMP; Belongs to the inositol monophosphatase superfamily (397 aa)
           
  0.446
AT3G03270
Adenine nucleotide alpha hydrolases-like superfamily protein; Involved in response to stress; Located in plasma membrane, membrane; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- UspA (InterPro-IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro-IPR014729); BEST Arabidopsis thaliana protein match is- Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR-AT3G53990.1); Has 554 Blast hits to 554 proteins in 50 species- Archae - 0; Bacteria - 8; Metazoa - 18; Fungi - 14; Plants - 512; Viruses - 0; Ot [...] (201 aa)
           
  0.446
GRP-3
Encodes a glycine-rich protein that is expressed mainly in stems and leaves. mRNA levels are upregulated in response to ABA, salicylic acid and ethylene but downregulated in response to dessication (145 aa)
           
  0.432
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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