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AT1G23280 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G23280" - MAK16 protein-related in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G23280MAK16 protein-related (303 aa)    
Predicted Functional Partners:
AT5G04600
RNA recognition motif-containing protein (222 aa)
     
      0.998
AT2G40360
transducin/WD-40 repeat-containing protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (753 aa)
     
 
  0.998
AT4G25730
FtsJ-like methyltransferase family protein; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (821 aa)
     
      0.998
AT1G50920
Nucleolar GTP-binding protein; Involved in the biogenesis of the 60S ribosomal subunit (671 aa)
     
 
  0.996
AT1G52930
Ribosomal RNA processing Brix domain protein (320 aa)
     
      0.996
AT5G13830
FtsJ-like methyltransferase family protein (224 aa)
     
      0.995
AT5G20600
Uncharacterized protein (532 aa)
     
      0.993
AT3G15460
Ribosomal RNA processing Brix domain protein (315 aa)
     
      0.993
AT2G44860
Large subunit ribosomal protein L24e; Involved in the biogenesis of the 60S ribosomal subunit. Ensures the docking of NOG1 to pre-60S particles (159 aa)
     
 
  0.993
AT1G10300
Nucleolar GTP-binding protein; Involved in the biogenesis of the 60S ribosomal subunit (687 aa)
     
 
  0.993
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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