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AT1G23350 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G23350" - Plant invertase/pectin methylesterase inhibitor superfamily protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G23350Plant invertase/pectin methylesterase inhibitor superfamily protein (159 aa)    
Predicted Functional Partners:
AT3G01270
Putative pectate lyase 7 (475 aa)
     
        0.471
sks13
SKU5 similar 13 (551 aa)
     
        0.467
AT5G45880
pollen_Ole_e_I-domain containing protein (174 aa)
     
        0.455
AT3G13227
Serine-rich protein-related (111 aa)
     
        0.455
AT5G39880
Uncharacterized protein (363 aa)
     
        0.448
AT5G15110
Putative pectate lyase 19 (472 aa)
     
        0.448
AT4G03290
Calmodulin-like protein 6; Potential calcium sensor (154 aa)
     
        0.448
AT3G01240
Uncharacterized protein (130 aa)
     
        0.448
AT3G07820
Polygalacturonase-like protein (391 aa)
     
        0.447
AT3G01230
Uncharacterized protein (126 aa)
     
        0.447
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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