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AT1G23390 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G23390" - Kelch repeat-containing F-box protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G23390Kelch repeat-containing F-box protein (394 aa)    
Predicted Functional Partners:
AT2G44130
F-box/kelch-repeat protein (409 aa)
     
   
  0.934
AT1G80440
F-box/kelch-repeat protein (354 aa)
     
 
    0.925
AT3G59940
F-box/kelch-repeat protein SKIP20; Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (418 aa)
     
   
  0.894
AT3G16850
Pectin lyase-like superfamily protein (455 aa)
           
  0.860
TPS8
Trehalose-6-phosphatase synthase S8 (856 aa)
     
   
  0.850
AT2G20670
Uncharacterized protein (294 aa)
     
        0.820
ATCTH
Zinc finger CCCH domain-containing protein 23 (315 aa)
     
        0.819
J8
Chaperone protein dnaJ 8; Have a continuous role in plant development probably in the structural organization of compartments (163 aa)
     
        0.818
AT5G22920
CHY-type/CTCHY-type/RING-type Zinc finger protein (291 aa)
     
        0.810
AT4G23390
Uncharacterized protein (401 aa)
           
  0.809
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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