STRINGSTRING
AT1G23460 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G23460" - Polygalacturonase in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G23460Polygalacturonase (460 aa)    
Predicted Functional Partners:
AT3G05620
Pectinesterase 22; Acts in the modification of cell walls via demethylesterification of cell wall pectin (543 aa)
   
 
  0.730
AT5G27870
Pectinesterase 28; Acts in the modification of cell walls via demethylesterification of cell wall pectin (732 aa)
   
 
  0.714
AT3G06830
Pectinesterase 23; Acts in the modification of cell walls via demethylesterification of cell wall pectin (568 aa)
   
 
  0.714
AT3G05610
Pectinesterase 21; Acts in the modification of cell walls via demethylesterification of cell wall pectin (669 aa)
   
 
  0.714
AT5G64640
Putative pectinesterase/pectinesterase inhibitor 64; Acts in the modification of cell walls via demethylesterification of cell wall pectin (602 aa)
       
  0.714
AT5G61680
Putative pectinesterase 63; Acts in the modification of cell walls via demethylesterification of cell wall pectin (338 aa)
       
  0.714
QRT1
QUARTET 1; Pectinesterase required for cell type-specific pectin degradation to separate microspores (380 aa)
       
  0.714
PMEPCRF
Pectin methylesterase PCR fragment F; Acts in the modification of cell walls via demethylesterification of cell wall pectin (587 aa)
       
  0.714
AT5G51500
Putative pectinesterase/pectinesterase inhibitor 60; Acts in the modification of cell walls via demethylesterification of cell wall pectin (540 aa)
       
  0.714
AT5G51490
Putative pectinesterase/pectinesterase inhibitor 59; Acts in the modification of cell walls via demethylesterification of cell wall pectin (536 aa)
       
  0.714
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (17%) [HD]