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STRINGSTRING
AT1G23670 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G23670" - Domain of unknown function in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G23670Domain of unknown function (DUF220); Contains the following InterPro domains- Protein of unknown function DUF220 (InterPro-IPR003863); BEST Arabidopsis thaliana protein match is- Domain of unknown function (DUF220) (TAIR-AT1G23520.1); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (264 aa)    
Predicted Functional Partners:
At1g75930
GDSL esterase/lipase EXL6; Required for the formation of pollen coats and male fertility (343 aa)
     
        0.442
AT1G30350
Pectin lyase-like superfamily protein; Its function is described as lyase activity, pectate lyase activity; Involved in biological_process unknown; Located in endomembrane system; Expressed in petal, leaf whorl, sepal, flower; Expressed during 4 anthesis, petal differentiation and expansion stage; Contains the following InterPro domains- Pectin lyase fold/virulence factor (InterPro-IPR011050), AmbAllergen (InterPro-IPR018082), Pectate lyase/Amb allergen (InterPro-IPR002022), Pectin lyase fold (InterPro-IPR012334); BEST Arabidopsis thaliana protein match is- Pectin lyase-like superfamil [...] (368 aa)
     
        0.440
AT4G08670
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Its function is described as lipid binding; Involved in lipid transport; Located in anchored to membrane; Expressed in 8 plant structures; Expressed during L mature pollen stage, 4 anthesis, petal differentiation and expansion stage; Contains the following InterPro domains- Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro-IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro-IPR003612), Plant lipid transfer protein/Par allergen ( [...] (208 aa)
     
        0.439
AT5G48210
Protein of unknown function (DUF1278); Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Expressed in petal, leaf whorl, sepal, flower; Expressed during petal differentiation and expansion stage; Contains the following InterPro domains- Protein of unknown function DUF1278 (InterPro-IPR010701); BEST Arabidopsis thaliana protein match is- ECA1 gametogenesis related family protein (TAIR-AT3G42565.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 34 [...] (103 aa)
     
        0.438
GRP16
Encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stages 11 and 12) (244 aa)
     
        0.433
AT4G14815
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Its function is described as lipid binding; Involved in lipid transport; Located in anchored to membrane; Expressed in petal, leaf whorl, sepal, flower; Expressed during 4 anthesis, petal differentiation and expansion stage; Contains the following InterPro domains- Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro-IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro-IPR003612), Plant lipid transfer protein/Par allergen (InterPro- [...] (156 aa)
     
        0.433
AT1G66850
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Its function is described as lipid binding; Involved in lipid transport; Located in endomembrane system; Expressed in 8 plant structures; Expressed during 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; Contains the following InterPro domains- Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro-IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro-IPR003612), Plant lipid transfer protein/hydrophobi [...] (102 aa)
     
        0.433
AT1G44224
Encodes a ECA1 gametogenesis related family protein (231 aa)
     
        0.432
cPT8
Undecaprenyl pyrophosphate synthetase family protein; Catalyzes cis-prenyl chain elongation to produce the polyprenyl backbone of dolichol, a glycosyl carrier-lipid required for the biosynthesis of several classes of glycoprotein; Belongs to the UPP synthase family (271 aa)
     
        0.431
AT3G21990
Cysteine-rich repeat secretory protein 29; Domain of unknown function (DUF26); Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Contains the following InterPro domains- Protein of unknown function DUF26 (InterPro-IPR002902); BEST Arabidopsis thaliana protein match is- Domain of unknown function (DUF26) (TAIR-AT4G20670.1); Has 1420 Blast hits to 1390 proteins in 20 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1420; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (256 aa)
     
        0.429
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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