STRINGSTRING
AT1G23720 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G23720" - Proline-rich extensin-like family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G23720Proline-rich extensin-like family protein (895 aa)    
Predicted Functional Partners:
HRGP1
Hydroxyproline-rich glycoprotein; Structural component which strengthens the primary cell wall (699 aa)
     
        0.779
EXT10
Extensin 10 (689 aa)
     
        0.579
AT4G08410
Proline-rich extensin-like family protein (707 aa)
     
        0.531
AT3G28550
Proline-rich extensin-like family protein (1018 aa)
     
        0.520
AT5G06630
Proline-rich extensin-like family protein (440 aa)
     
        0.499
AT3G54580
Proline-rich extensin-like family protein; Structural component which strengthens the primary cell wall (951 aa)
     
        0.447
FUT5
Fucosyltransferase 5; May be involved in cell wall biosynthesis. May act as a fucosyltransferase (533 aa)
     
        0.436
AT3G21340
Leucine-rich repeat protein kinase-like protein; Probable receptor with a dual specificity kinase activity acting on both serine/threonine- and tyrosine-containing substrates (899 aa)
     
        0.424
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (17%) [HD]