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AT1G23780 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G23780" - F-box family protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G23780F-box family protein; Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (475 aa)    
Predicted Functional Partners:
PBG1
20S proteasome beta subunit G1; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (246 aa)
       
      0.718
AT3G53970
Probable proteasome inhibitor; Could play an important role in control of proteasome function. Inhibits the hydrolysis of protein and peptide substrates by the 20S proteasome (By similarity) (302 aa)
     
 
  0.630
AT3G18940
Proteasome assembly chaperone 2; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with PSMG1 (281 aa)
     
      0.630
AT1G48530
Proteasome inhibitor-like protein; Contains the following InterPro domains- Proteasome Inhibitor PI31 (InterPro-IPR021625); BEST Arabidopsis thaliana protein match is- proteasome inhibitor-related (TAIR-AT3G53970.2); Has 43 Blast hits to 43 proteins in 18 species- Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (175 aa)
       
 
  0.612
PBD2
Proteasome subunit beta type-2-B; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1B family (215 aa)
       
      0.591
PBD1
Proteasome subunit beta type-2-A; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1B family (204 aa)
       
      0.591
AT1G27752
Ubiquitin system component Cue protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in chloroplast; Contains the following InterPro domains- Ubiquitin system component Cue (InterPro-IPR003892); Has 423 Blast hits to 397 proteins in 140 species- Archae - 0; Bacteria - 35; Metazoa - 153; Fungi - 103; Plants - 62; Viruses - 0; Other Eukaryotes - 70 (source- NCBI BLink) (873 aa)
     
   
  0.487
AT3G20430
Contains the following InterPro domains- Phosphorylated adapter RNA export protein, RNA-binding domain (InterPro-IPR019385); Has 110 Blast hits to 110 proteins in 51 species- Archae - 0; Bacteria - 3; Metazoa - 56; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 15 (source- NCBI BLink) (265 aa)
     
   
  0.479
COP13
Proteasome component (PCI) domain protein; Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes such as photomorphogenesis and auxin and jasmonate responses. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. It is involved in repression of photomorphogenesis in darkness by regulating the activity of COP1- containing Ubl ligase complexes. The complex is [...] (429 aa)
       
      0.420
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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