STRINGSTRING
RSZ21 protein (Arabidopsis thaliana) - STRING interaction network
"RSZ21" - RS-containing zinc finger protein 21 in Arabidopsis thaliana
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
RSZ21RS-containing zinc finger protein 21; Probably involved in intron recognition and spliceosome assembly (187 aa)    
Predicted Functional Partners:
RS2Z33
Arginine/serine-rich zinc knuckle-containing protein 33; Splicing factor involved in constitutive and/or alternative splicing. Regulates the splicing of its own pre-mRNA and the alternative splicing of RS30, RS31 and RS34. Associates the cyclin-depedent kinase G1 (CDKG1) with the spliceosome and recruits it to U1 snRNP to facilitate splicing (290 aa)
     
0.999
SR34
Pre-mRNA-splicing factor SF2; General splicing factor. Can promote splice site selection in vitro presumably by antagonizing the effects of the A1 heterogeneous nuclear ribonucleoprotein. May have an essential function during early plant development (303 aa)
     
0.999
RSZ22
Protein serine/arginine-rich 22; Sequence-specific RNA-binding protein probably involved in pre-mRNA splicing. In vitro, can complement efficiently splicing-deficient mammalian SRSF7-depleted HeLa cell extract (200 aa)
     
0.999
SCL30
SC35-like splicing factor 30; Involved in intron recognition and spliceosome assembly (Probable). Probably active at the 5’ splice sites (262 aa)
     
 
  0.999
SCL28
SC35-like splicing factor 28; Involved in intron recognition and spliceosome assembly (Probable). Probably active at the 5’ splice sites (236 aa)
     
 
  0.998
SCL30A
SC35-like splicing factor 30A; Involved in intron recognition and spliceosome assembly. Binds probably to multiple 5’-GAAG-3’ repeats found in its third intron, suggesting autoregulation of alternative splicing (PubMed-22913769). May be necessary for accurate splicing of the 3’ region of introns (262 aa)
     
 
  0.998
U1-70K
Encodes U1 snRNP 70K; Mediates the splicing of pre-mRNA by binding to the loop I region of U1-snRNA (427 aa)
     
  0.993
SR45
Arginine/serine-rich 45; Involved in 5’ and 3’ splicing site selection of introns, and may bridge the 5’ and 3’ components of the spliceosome. Isoform 1 is required during flower petal development and isoform 2 is involved in root growth. Regulates negatively glucose and abscisic acid (ABA) signaling during early seedling development. Involved in the RNA-directed DNA methylation pathway (PubMed-22274613) (425 aa)
     
  0.992
SC35
Ortholog of human splicing factor SC35; Probably involved in intron recognition and spliceosome assembly, but not involved in alternative splicing regulation of the SCL33 intron (303 aa)
     
  0.989
AT2G43370
RNA-binding (RRM/RBD/RNP motifs) family protein; May facilitate 5’ splice site recognition in the minor spliceosome. May be involved in interactions with components of the major spliceosome bound to the pyrimidine tract of an upstream U2-type intron (333 aa)
     
  0.978
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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