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AT1G24130 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G24130" - Transducin/WD40 repeat-like superfamily protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G24130Transducin/WD40 repeat-like superfamily protein; Its function is described as nucleotide binding; Involved in biological_process unknown; Located in chloroplast, heterotrimeric G-protein complex; Contains the following InterPro domains- WD40 repeat 2 (InterPro-IPR019782), WD40 repeat, conserved site (InterPro-IPR019775), WD40 repeat (InterPro-IPR001680), G-protein beta WD-40 repeat, region (InterPro-IPR020472), WD40 repeat-like-containing domain (InterPro-IPR011046), WD40-repeat-containing domain (InterPro-IPR017986), WD40/YVTN repeat-like-containing domain (InterPro-IPR015943), WD40 r [...] (415 aa)    
Predicted Functional Partners:
AT1G15850
Transducin/WD40 repeat-like superfamily protein; Its function is described as nucleotide binding; Involved in biological_process unknown; Located in chloroplast; Expressed in flower; Expressed during petal differentiation and expansion stage; Contains the following InterPro domains- WD40 repeat 2 (InterPro-IPR019782), WD40 repeat-like-containing domain (InterPro-IPR011046), WD40-repeat-containing domain (InterPro-IPR017986), WD40/YVTN repeat-like-containing domain (InterPro-IPR015943), WD40 repeat (InterPro-IPR001680), WD40 repeat, subgroup (InterPro-IPR019781); BEST Arabidopsis thalia [...] (140 aa)
   
   
  0.938
AT4G02660
Beige/BEACH domain ;WD domain, G-beta repeat protein; Its function is described as binding; Involved in signal transduction; Located in chloroplast; Expressed in 10 plant structures; Expressed during 6 growth stages; Contains the following InterPro domains- WD40 repeat 2 (InterPro-IPR019782), Beige/BEACH (InterPro-IPR000409), WD40 repeat, conserved site (InterPro-IPR019775), WD40 repeat (InterPro-IPR001680), WD40 repeat-like-containing domain (InterPro-IPR011046), WD40-repeat-containing domain (InterPro-IPR017986), WD40/YVTN repeat-like-containing domain (InterPro-IPR015943), Armadillo [...] (3527 aa)
     
 
  0.924
AT2G02590
Small multi-drug export protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in chloroplast; Expressed in 21 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Putative small multi-drug export (InterPro-IPR009577); Has 405 Blast hits to 405 proteins in 185 species- Archae - 65; Bacteria - 295; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 22 (source- NCBI BLink) (324 aa)
           
  0.903
PHP
Encodes PLANT HOMOLOGOUS TO PARAFIBROMIN (PHP), a homolog of human Paf1 Complex (Paf1C) subunit Parafibromin. Human Parafibromin assists in mediating output from the Wnt signaling pathway, and dysfunction of the encoding gene HRPT2 conditions specific cancer-related disease phenotypes. PHP resides in a ~670-kDa protein complex in nuclear extracts, and physically interacts with other known Paf1C-related proteins in vivo. Loss of PHP specifically conditioned accelerated phase transition from vegetative growth to flowering and resulted in misregulation of a very limited subset of genes th [...] (415 aa)
     
 
  0.842
MAC3B
Pre-mRNA-processing factor 19 homolog 2; Probable ubiquitin-protein ligase which is mainly involved pre-mRNA splicing and DNA repair (By similarity). Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immunity (525 aa)
   
   
  0.791
FZR3
Protein FIZZY-RELATED 3; Activator protein that regulates the ubiquitin ligase activity and substrate specificity of the anaphase promoting complex/cyclosome (APC/C); Belongs to the WD repeat CDC20/Fizzy family (481 aa)
   
     
  0.786
FZR2
Protein FIZZY-RELATED 2; Activator protein that regulates the ubiquitin ligase activity and substrate specificity of the anaphase promoting complex/cyclosome (APC/C). Necessary and sufficient for endoreduplication and correct cell expansion. Controls meristem size by stimulating endoreduplication in the elongation zone (483 aa)
   
     
  0.767
ELF7
Hydroxyproline-rich glycoprotein family protein; Encodes a PAF1 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast PAF1 is a component of a five-member complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5’] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin (589 aa)
       
 
  0.732
AT1G76630
Tetratricopeptide repeat (TPR)-like superfamily protein; Component of the SKI complex which is thought to be involved in exosome-mediated RNA decay and associates with transcriptionally active genes in a manner dependent on PAF1 complex (PAF1C) (1168 aa)
       
 
  0.680
AT3G46960
RNA helicase, ATP-dependent, SK12/DOB1 protein; Component of the SKI complex which is thought to be involved in exosome-mediated RNA decay and associates with transcriptionally active genes in a manner dependent on PAF1 complex (PAF1C). Involved in the regulation of potassium deprivation stress response (1347 aa)
     
 
  0.635
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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