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AT1G24130 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G24130" - WD40 domain-containing protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G24130WD40 domain-containing protein (415 aa)    
Predicted Functional Partners:
AT1G15850
WD40 domain-containing protein (140 aa)
   
     
  0.905
AT5G57460
Uncharacterized protein (646 aa)
           
  0.845
AT4G02660
Beige/BEACH and WD40 domain-containing protein (3527 aa)
           
  0.845
AT1G51350
ARM repeat superfamily protein (666 aa)
           
  0.845
CLC2
Clathrin light chain 2; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (258 aa)
     
   
  0.681
FZR3
FIZZY-related 3; Activator protein that regulates the ubiquitin ligase activity and substrate specificity of the anaphase promoting complex/cyclosome (APC/C) (481 aa)
   
     
  0.649
AT1G67120
AAA ATPase containing von Willebrand factor type A domain-containing protein; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits (5393 aa)
           
  0.636
SARA1A
Arf/Sar family protein (193 aa)
           
  0.636
AP3M
ZIG SUPPRESSOR 4; Part of the AP-3 complex, an adaptor-related complex which seems to be clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. It also function in maintaining the identity of lytic vacuoles and in regulating the transition between storage and lytic vacuoles (415 aa)
           
  0.604
EMB269
EMBRYO DEFECTIVE 269; GTP-binding protein involved in membrane biogenesis and protein synthesis in chloroplast. Functions in the biogenesis of thylakoid membrane and plastid ribosome during chloroplast development. May be involved in the vesicular traffic between the chloroplast inner envelope membrane and thylakoids. Possesses GTPase activity in vitro (681 aa)
           
  0.601
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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