STRINGSTRING
AT1G24145 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G24145" - Uncharacterized protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G24145Uncharacterized protein (128 aa)    
Predicted Functional Partners:
AT1G24147
Uncharacterized protein (127 aa)
     
   
  0.945
GYRB3
DNA GYRASE B3 (546 aa)
           
  0.863
AT3G28580
AAA-type ATPase family protein (500 aa)
     
   
  0.698
XRI1
Protein XRI1; Required for mitotic division of the generative cell nucleus and the development of mature tricellular pollen grains, and for male and female meiosis (300 aa)
           
  0.675
AT3G49160
Pyruvate kinase (710 aa)
           
  0.600
TSO2
TSO MEANING ’UGLY’ IN CHINESE 2; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. Involved in DNA damage repair and programmed cell death inhibition (332 aa)
           
  0.600
CYSD2
Cysteine synthase D2; Acts as a cysteine synthase. The cysteine synthesis reaction is more efficient than the cyanoalanine synthase activity (323 aa)
           
  0.558
ATRAD17
RADIATION SENSITIVE 17; Seems to be involved in regulation of DNA repair correlated to non-homologous double strand breaks (DSBs) repair. In vitro, involved in rapid but not in slow DSB repair mechanism (599 aa)
           
  0.551
SPO11-2
Sporulation 11-2; Component of a topoisomerase 6 complex specifically required for meiotic recombination (PubMed-17018031, PubMed-17965269, PubMed-26917763). Together with MTOPVIB, mediates DNA cleavage that forms the double-strand breaks (DSB) that initiate meiotic recombination (PubMed-26917763). The complex promotes relaxation of negative and positive supercoiled DNA and DNA decatenation through cleavage and ligation cycles (PubMed-17018031, PubMed-17965269, PubMed-26917763) (383 aa)
           
  0.506
ATMND1
Meiotic nuclear division protein 1-like protein; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Stimulates both DMC1/LIM15- and RAD51-mediated homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks (230 aa)
           
  0.491
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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