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AT1G24220 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G24220" - Paired amphipathic helix repeat-containing protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G24220Paired amphipathic helix repeat-containing protein; Its function is described as molecular_function unknown; Involved in regulation of transcription, DNA-dependent; Located in nucleus; Expressed in cultured cell; Contains the following InterPro domains- Paired amphipathic helix (InterPro-IPR003822); BEST Arabidopsis thaliana protein match is- Paired amphipathic helix (PAH2) superfamily protein (TAIR-AT1G27240.1); Has 1794 Blast hits to 623 proteins in 172 species- Archae - 0; Bacteria - 12; Metazoa - 580; Fungi - 353; Plants - 743; Viruses - 0; Other Eukaryotes - 106 (source- NCBI BLink) (744 aa)    
Predicted Functional Partners:
AT3G20360
TRAF-like family protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Contains the following InterPro domains- TRAF-like (InterPro-IPR008974), MATH (InterPro-IPR002083); BEST Arabidopsis thaliana protein match is- TRAF-like family protein (TAIR-AT3G20370.1); Has 719 Blast hits to 567 proteins in 35 species- Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 12; Plants - 678; Viruses - 0; Other Eukaryotes - 23 (source- NCBI BLink) (363 aa)
     
   
  0.954
AT1G33910
P-loop containing nucleoside triphosphate hydrolases superfamily protein; Its function is described as GTP binding; Involved in response to bacterium; Contains the following InterPro domains- AIG1 (InterPro-IPR006703); BEST Arabidopsis thaliana protein match is- P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR-AT1G33900.1); Has 1171 Blast hits to 1020 proteins in 77 species- Archae - 7; Bacteria - 15; Metazoa - 792; Fungi - 13; Plants - 220; Viruses - 2; Other Eukaryotes - 122 (source- NCBI BLink); Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- lik [...] (301 aa)
           
  0.951
AT4G10510
Subtilisin-like protease SBT3.7; Subtilase family protein; Its function is described as identical protein binding, serine-type endopeptidase activity; Involved in proteolysis, negative regulation of catalytic activity; Expressed in male gametophyte, root; Contains the following InterPro domains- Protease-associated PA (InterPro-IPR003137), Proteinase inhibitor, propeptide (InterPro-IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro-IPR000209), Peptidase S8, subtilisin-related (InterPro-IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro-IPR022398), Proteinas [...] (765 aa)
           
  0.903
AT2G30670
NAD(P)-binding Rossmann-fold superfamily protein; Its function is described as oxidoreductase activity, binding, catalytic activity; Involved in oxidation reduction, metabolic process; Located in cellular_component unknown; Expressed in 18 plant structures; Expressed during 12 growth stages; Contains the following InterPro domains- NAD(P)-binding domain (InterPro-IPR016040), Glucose/ribitol dehydrogenase (InterPro-IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro-IPR002198); BEST Arabidopsis thaliana protein match is- tropinone reductase (TAIR-AT2G29330.1); Has 119871 Blast [...] (262 aa)
           
  0.838
AT3G52250
Duplicated homeodomain-like superfamily protein; Encodes a protein with a putative role in mRNA splicing (1656 aa)
     
 
  0.813
AT3G13350
HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; Binds preferentially DNA with A/T-rich content (319 aa)
     
 
  0.766
AT1G76110
HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; Binds preferentially DNA with A/T-rich content. Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus (338 aa)
     
 
  0.766
AT1G55650
HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; Binds preferentially DNA with A/T-rich content (337 aa)
     
 
  0.766
AT1G04880
HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; Binds preferentially DNA with A/T-rich content (448 aa)
     
 
  0.766
ELF6
Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein; Early Flowering 6 (ELF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a repressor in the photoperiod pathway. ELF6 interacts with BES1 in a Y2H assay, in vitro, and in Arabidosis protoplasts (based on BiFC). ELF6 may play a role in brassinosteroid signaling by affecting histone methylation in the promoters of BR-responsive genes; Belongs to the JHDM3 histone demethylase family (1340 aa)
     
 
  0.743
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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