STRINGSTRING
EMB2421 protein (Arabidopsis thaliana) - STRING interaction network
"EMB2421" - EMBRYO DEFECTIVE 2421 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMB2421EMBRYO DEFECTIVE 2421 (709 aa)    
Predicted Functional Partners:
AT1G19140
Uncharacterized protein (312 aa)
     
 
  0.924
ABC1
ABC transporter 1; Atypical kinase involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration (623 aa)
     
 
  0.920
CHLM
Magnesium-protoporphyrin IX methyltransferase; Converts Mg-protoporphyrin IX to Mg-protoporphyrin IX methylester using S-adenosyl-L-methionine as a cofactor. Involved in chloroplast-to-nucleus signaling by acting as a negative effector of nuclear photosynthetic gene expression (312 aa)
   
  0.918
COQ3
Coenzyme Q 3; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway (322 aa)
   
  0.918
AT5G57300
Ubiquinone biosynthesis methyltransferase COQ5; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2) (288 aa)
     
  0.851
MENG
S-adenosylmethionine-dependent methyltransferase domain-containing protein; Involved in the biosynthesis of phylloquinone (vitamin K1). Methyltransferase required for the conversion of 2-phytyl- 1,4-beta-naphthoquinone to phylloquinone (261 aa)
     
  0.851
emb2737
Embryo defective 2737 (459 aa)
           
  0.845
AT5G14710
Proteasome assembly chaperone 3 (124 aa)
           
  0.809
ZEU1
ZEUS1 (271 aa)
         
  0.743
AT2G03690
Ubiquinone biosynthesis protein COQ4 homolog; Component of the coenzyme Q biosynthetic pathway. May play a role in organizing a multi-subunit COQ enzyme complex required for coenzyme Q biosynthesis. Required for steady-state levels of other COQ polypeptides (226 aa)
     
 
  0.728
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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