STRINGSTRING
AT1G24530 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G24530" - transducin/WD-40 repeat-containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G24530transducin/WD-40 repeat-containing protein (418 aa)    
Predicted Functional Partners:
AT3G27330
C3H4 type zinc finger protein (913 aa)
           
  0.801
SAP7
Stress-associated protein 7; May be involved in environmental stress response (175 aa)
           
  0.731
AT5G63100
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (329 aa)
           
  0.703
GAE5
UDP-D-glucuronate 4-epimerase; Involved in the synthesis of the negatively charged monosaccharide that forms the backbone of pectic cell wall components (436 aa)
           
  0.675
AT4G38310
Galactosyl transferase GMA12/MNN10 family protein (120 aa)
           
  0.670
AT5G21222
SNF1-like protein kinase (831 aa)
           
  0.638
AT2G46140
Late embryogenesis abundant protein (166 aa)
           
  0.603
VAMP726
Vesicle-associated membrane protein 72; Involved in the targeting and/or fusion of transport vesicles to their target membrane (220 aa)
           
  0.553
VIP3
Vernalization independence 3; Component of the PAF1 complex (PAF1C) which is involved in histone modifications such as methylation on histone H3 ’Lys-4’ (H3K4me3) (PubMed-20363855). Involved in regulation of flowering time. Required for the expression of the flowering repressor and MADS box gene FLC (PubMed-12750345, PubMed-18725930). Required for histone H3 trimethylation on ’Lys-4’ H3K4me3 and histone dimethylation on ’Lys-36’ H3K36me2 at the FLC locus. Prevents trimethylation on ’Lys-27’ H3K276me3 at the same locus (PubMed-18725930). Not required for meiotic recombination or progres [...] (321 aa)
   
          0.526
AT2G05720
WD40 domain-containing protein (276 aa)
   
          0.526
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (18%) [HD]