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AT1G24530 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G24530" - Transducin/WD40 repeat-like superfamily protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G24530Transducin/WD40 repeat-like superfamily protein; Its function is described as nucleotide binding; Involved in biological_process unknown; Located in plasma membrane, heterotrimeric G-protein complex; Expressed in 24 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- WD40 repeat 2 (InterPro-IPR019782), WD40 repeat-like-containing domain (InterPro-IPR011046), WD40-repeat-containing domain (InterPro-IPR017986), WD40/YVTN repeat-like-containing domain (InterPro-IPR015943), WD40 repeat (InterPro-IPR001680), WD40 repeat, subgroup (InterPro-IPR019781 [...] (418 aa)    
Predicted Functional Partners:
AT5G63100
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Involved in biological_process unknown; Located in chloroplast; Expressed in 18 plant structures; Expressed during 12 growth stages; BEST Arabidopsis thaliana protein match is- S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR-AT5G44600.1); Has 163 Blast hits to 163 proteins in 58 species- Archae - 2; Bacteria - 69; Metazoa - 2; Fungi - 2; Plants - 84; Viruses - 0; Other Eukaryotes - 4 (source- NCBI BLink) (329 aa)
           
  0.954
AT3G27330
Zinc finger (C3HC4-type RING finger) family protein; Its function is described as zinc ion binding; Expressed in 18 plant structures; Expressed during 8 growth stages; Contains the following InterPro domains- Zinc finger, RING-type, conserved site (InterPro-IPR017907), Zinc finger, RING-type (InterPro-IPR001841), Protein of unknown function DUF23 (InterPro-IPR008166); BEST Arabidopsis thaliana protein match is- Domain of unknown function (DUF23) (TAIR-AT5G40720.1); Has 9172 Blast hits to 9085 proteins in 2351 species- Archae - 0; Bacteria - 208; Metazoa - 7155; Fungi - 537; Plants - 66 [...] (913 aa)
           
  0.954
SAP7
Zinc finger A20 and AN1 domain-containing stress-associated protein 7; May be involved in environmental stress response (175 aa)
           
  0.894
PHP
Encodes PLANT HOMOLOGOUS TO PARAFIBROMIN (PHP), a homolog of human Paf1 Complex (Paf1C) subunit Parafibromin. Human Parafibromin assists in mediating output from the Wnt signaling pathway, and dysfunction of the encoding gene HRPT2 conditions specific cancer-related disease phenotypes. PHP resides in a ~670-kDa protein complex in nuclear extracts, and physically interacts with other known Paf1C-related proteins in vivo. Loss of PHP specifically conditioned accelerated phase transition from vegetative growth to flowering and resulted in misregulation of a very limited subset of genes th [...] (415 aa)
     
 
  0.842
AT2G46140
Desiccation-related protein At2g46140; Late embryogenesis abundant protein; Its function is described as molecular_function unknown; Involved in response to desiccation, embryo development ending in seed dormancy; Located in plasma membrane; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Water stress and hypersensitive response domain (InterPro-IPR013990), Late embryogenesis abundant protein, group 2 (InterPro-IPR004864); BEST Arabidopsis thaliana protein match is- Late embryogenesis abundant protein (TAIR-AT1G01470.1); Has [...] (166 aa)
           
  0.834
ELF7
Hydroxyproline-rich glycoprotein family protein; Encodes a PAF1 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast PAF1 is a component of a five-member complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5’] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin (589 aa)
       
 
  0.732
AT1G76630
Tetratricopeptide repeat (TPR)-like superfamily protein; Component of the SKI complex which is thought to be involved in exosome-mediated RNA decay and associates with transcriptionally active genes in a manner dependent on PAF1 complex (PAF1C) (1168 aa)
       
 
  0.680
AT3G46960
RNA helicase, ATP-dependent, SK12/DOB1 protein; Component of the SKI complex which is thought to be involved in exosome-mediated RNA decay and associates with transcriptionally active genes in a manner dependent on PAF1 complex (PAF1C). Involved in the regulation of potassium deprivation stress response (1347 aa)
     
 
  0.635
EMB25
DExH-box ATP-dependent RNA helicase DExH15 chloroplastic; RNA helicase involved in group II intron splicing. Essential protein required during embryogenesis. Involved in post-transcriptional gene silencing. Modulates the determination of cell fate. Necessary for normal plasmodesmata (PD) development and aperture regulation; Belongs to the DExH box helicase family (1171 aa)
     
 
  0.635
AT5G21222
Pentatricopeptide repeat-containing protein At5g21222; Protein kinase family protein; Its function is described as protein serine/threonine kinase activity, protein kinase activity, ATP binding; Involved in protein amino acid phosphorylation; Located in cellular_component unknown; Contains the following InterPro domains- Serine/threonine-protein kinase domain (InterPro-IPR002290), Serine/threonine-protein kinase-like domain (InterPro-IPR017442), Protein kinase-like domain (InterPro-IPR011009), Serine/threonine-protein kinase, active site (InterPro-IPR008271), CBL-interacting protein ki [...] (831 aa)
       
 
  0.613
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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