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LpxC1 protein (Arabidopsis thaliana) - STRING interaction network
"LpxC1" - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
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gene co-occurrence
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textmining
co-expression
protein homology
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LpxC1UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that in bacteria anchors the lipopolysaccharide to the outer membrane of the cell. Lipid A-like molecules in plants may serve as structural components of the outer membranes of mitochondria and/or chloroplasts, or may be involved in signal transduction or plant defense responses (Potential) (326 aa)    
Predicted Functional Partners:
LpxK
Probable tetraacyldisaccharide 4’-kinase, mitochondrial; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that in bacteria anchors the lipopolysaccharide to the outer membrane of the cell. Transfers the gamma-phosphate of ATP to the 4’-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4’-bis-phosphate (lipid IVA). Lipid A-like molecules in plants may serve as structural components of the outer membranes of mitochondria and/or chloroplasts, or may be involved in signal transduction or plant defense responses [...] (395 aa)
 
 
 
  0.967
LpxD2
Probable UDP-3-O-acylglucosamine N-acyltransferase 2, mitochondrial; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that in bacteria anchors the lipopolysaccharide to the outer membrane of the cell. Lipid A-like molecules in plants may serve as structural components of the outer membranes of mitochondria and/or chloroplasts, or may be involved in signal transduction or plant defense responses; Belongs to the transferase hexapeptide repeat family. LpxD subfamily (304 aa)
 
   
  0.967
LpxD1
Probable UDP-3-O-acylglucosamine N-acyltransferase 1, mitochondrial; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that in bacteria anchors the lipopolysaccharide to the outer membrane of the cell. Lipid A-like molecules in plants may serve as structural components of the outer membranes of mitochondria and/or chloroplasts, or may be involved in signal transduction or plant defense responses; Belongs to the transferase hexapeptide repeat family. LpxD subfamily (330 aa)
 
   
  0.967
LpxB
Probable lipid-A-disaccharide synthase, mitochondrial; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that in bacteria anchors the lipopolysaccharide to the outer membrane of the cell. Lipid A-like molecules in plants may serve as structural components of the outer membranes of mitochondria and/or chloroplasts, or may be involved in signal transduction or plant defense responses (Potential) (460 aa)
 
 
  0.961
LpxA
Probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that in bacteria anchors the lipopolysaccharide to the outer membrane of the cell. Lipid A-like molecules in plants may serve as structural components of the outer membranes of mitochondria and/or chloroplasts, or may be involved in signal transduction or plant defense responses (Potential) (336 aa)
 
     
  0.951
KDTA
Probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that in bacteria anchors the lipopolysaccharide to the outer membrane of the cell. Catalyzes the transfer of two 3-deoxy-D-manno-octulosonate (Kdo) residues from CMP-Kdo to lipid IV(A), the tetraacyldisaccharide-1,4’- bisphosphate precursor of lipid A. Lipid A-like molecules in plants may serve as structural components of the outer membranes of mitochondria and/or chloroplasts, or may be involved in signal transduction or plant defense responses; Be [...] (447 aa)
 
     
  0.931
AT1G25141
F-box associated ubiquitination effector family protein; Contains the following InterPro domains- F-box associated domain, type 1 (InterPro-IPR006527), F-box associated interaction domain (InterPro-IPR017451); BEST Arabidopsis thaliana protein match is- F-box and associated interaction domains-containing protein (TAIR-AT5G47300.1); Has 7236 Blast hits to 6390 proteins in 1409 species- Archae - 0; Bacteria - 2915; Metazoa - 1; Fungi - 0; Plants - 2305; Viruses - 0; Other Eukaryotes - 2015 (source- NCBI BLink) (234 aa)
 
 
   
  0.907
PFA-DSP5
Phosphotyrosine protein phosphatases superfamily protein; Its function is described as phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; Involved in dephosphorylation; Located in cellular_component unknown; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Protein-tyrosine phosphatase, active site (InterPro-IPR016130), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro-IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro-IPR004861); BEST Ar [...] (204 aa)
           
  0.836
AT3G27200
Cupredoxin superfamily protein; Its function is described as electron carrier activity, copper ion binding; Located in anchored to membrane; Expressed in 22 plant structures; Expressed during 12 growth stages; Contains the following InterPro domains- Plastocyanin-like (InterPro-IPR003245), Cupredoxin (InterPro-IPR008972); BEST Arabidopsis thaliana protein match is- uclacyanin 1 (TAIR-AT2G32300.1); Has 1603 Blast hits to 1540 proteins in 96 species- Archae - 0; Bacteria - 21; Metazoa - 19; Fungi - 24; Plants - 1498; Viruses - 0; Other Eukaryotes - 41 (source- NCBI BLink) (174 aa)
           
  0.772
CKS
3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial; Catalyzes the production of the sugar nucleotide CMP-3- deoxy-D-manno-octulosonate (CMP-KDO). CTP is the preferred nucleotide donor, but it can partially be replaced with UTP. Activates KDO during the biosynthesis of rhamnogalacturonan II (RG-II), a structurally complex pectic polysaccharide of the primary cell wall. RG-II is essential for the cell wall integrity of rapidly growing tissues and pollen tube growth and elongation (290 aa)
 
   
  0.721
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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