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AT1G24851 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G24851" - F5A9.15 in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G24851F5A9.15; Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G25025.1); Has 6812 Blast hits to 2172 proteins in 306 species- Archae - 0; Bacteria - 350; Metazoa - 1330; Fungi - 775; Plants - 255; Viruses - 55; Other Eukaryotes - 4047 (source- NCBI BLink) (258 aa)    
Predicted Functional Partners:
SAC51
Sequence-specific DNA binding transcription factors;transcription regulators; Encodes a bHLH(basic helix-loop-helix)-type transcription factor SAC51 [suppressor of acaulis 51]. Upregulation of SAC51 reverses the dwarf phenotype caused by a loss-of-function mutation in ACL5 (Arabidopsis thaliana ACAULIS 5) gene, suggesting that activation of SAC51 may lead to the expression of a subset of genes required for stem elongation (348 aa)
     
        0.412
CBSCBSPB4
CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein; Located in chloroplast; Expressed in male gametophyte, cultured cell, pollen tube; Expressed during M germinated pollen stage; Contains the following InterPro domains- Octicosapeptide/Phox/Bem1p (InterPro-IPR000270), Cystathionine beta-synthase, core (InterPro-IPR000644); BEST Arabidopsis thaliana protein match is- CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein (TAIR-AT5G50640.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants [...] (548 aa)
     
        0.412
AT5G09460
Sequence-specific DNA binding transcription factors;transcription regulators; Contains the following InterPro domains- Helix-loop-helix DNA-binding domain (InterPro-IPR001092); BEST Arabidopsis thaliana protein match is- sequence-specific DNA binding transcription factors;transcription regulators (TAIR-AT5G64340.1); Has 178 Blast hits to 178 proteins in 26 species- Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 1; Plants - 159; Viruses - 0; Other Eukaryotes - 10 (source- NCBI BLink) (326 aa)
     
        0.412
AT4G09310.1
SPla/RYanodine receptor (SPRY) domain-containing protein; Contains the following InterPro domains- B302 (SPRY)-like (InterPro-IPR001870), CTLH, C-terminal LisH motif (InterPro-IPR006595), LisH dimerisation motif (InterPro-IPR006594), Ran binding protein-like, CRA domain (InterPro-IPR013144), SPla/RYanodine receptor SPRY (InterPro-IPR003877); BEST Arabidopsis thaliana protein match is- SPla/RYanodine receptor (SPRY) domain-containing protein (TAIR-AT4G09200.1); Has 841 Blast hits to 827 proteins in 193 species- Archae - 0; Bacteria - 0; Metazoa - 362; Fungi - 175; Plants - 154; Viruses [...] (397 aa)
     
        0.412
AT3G62470
Pentatricopeptide repeat-containing protein At3g62470, mitochondrial; Pentatricopeptide repeat (PPR) superfamily protein; Contains the following InterPro domains- Pentatricopeptide repeat (InterPro-IPR002885); BEST Arabidopsis thaliana protein match is- Pentatricopeptide repeat (PPR) superfamily protein (TAIR-AT3G62540.1); Has 39079 Blast hits to 12185 proteins in 290 species- Archae - 4; Bacteria - 32; Metazoa - 449; Fungi - 607; Plants - 36694; Viruses - 0; Other Eukaryotes - 1293 (source- NCBI BLink) (599 aa)
     
        0.412
AT2G07751.1
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 protein; Its function is described as NADH dehydrogenase (ubiquinone) activity; Involved in oxidation reduction, mitochondrial electron transport, NADH to ubiquinone; Located in endomembrane system; Contains the following InterPro domains- NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 (InterPro-IPR000440); BEST Arabidopsis thaliana protein match is- NADH dehydrogenase 3 (TAIR-ATMG00990.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruse [...] (118 aa)
     
        0.412
AT2G07725.1
Ribosomal L5P family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in ribosome, intracellular; Contains the following InterPro domains- Ribosomal protein L5 (InterPro-IPR002132), Ribosomal protein L5, N-terminal (InterPro-IPR020927); BEST Arabidopsis thaliana protein match is- ribosomal protein L5 (TAIR-ATMG00210.1); Has 117 Blast hits to 117 proteins in 56 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 112; Viruses - 0; Other Eukaryotes - 5 (source- NCBI BLink) (185 aa)
     
        0.412
AT2G07708.1
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-ATMG00500.1); Has 9 Blast hits to 9 proteins in 2 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (141 aa)
     
        0.412
AT2G07674
Unknown conserved protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; BEST Arabidopsis thaliana protein match is- Unknown conserved protein (TAIR-ATMG01010.1); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (251 aa)
     
        0.412
AT2G07671.1
ATP synthase subunit C family protein; Its function is described as hydrogen ion transmembrane transporter activity, ATPase activity; Involved in proton transport, ATP synthesis coupled proton transport; Located in proton-transporting ATP synthase complex, coupling factor F(o), proton-transporting two-sector ATPase complex, proton-transporting domain; Contains the following InterPro domains- ATPase, F0 complex, subunit C, DCCD-binding site (InterPro-IPR020537), ATPase, F0/V0 complex, subunit C (InterPro-IPR002379), ATPase, F0 complex, subunit C (InterPro-IPR000454); BEST Arabidopsis th [...] (85 aa)
     
        0.412
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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