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AT1G25400 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G25400" - Uncharacterized protein F2J7.13 in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G25400Uncharacterized protein F2J7.13; Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G68440.1); Has 21 Blast hits to 21 proteins in 6 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (288 aa)    
Predicted Functional Partners:
AT1G76600
Uncharacterized protein At1g76600; Unknown protein; Its function is described as molecular_function unknown; Involved in N-terminal protein myristoylation; Located in nucleolus, nucleus; Expressed in 24 plant structures; Expressed during 15 growth stages; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (216 aa)
     
   
  0.980
HSPRO2
Nematode resistance protein-like HSPRO2; Positive regulator of basal resistance (435 aa)
     
   
  0.935
AT2G44500
O-fucosyltransferase family protein; May play a role in the biosynthesis of matrix polysaccharides and contribute to the biomechanics and development of the plant cell wall (573 aa)
     
   
  0.924
AT3G07350
Sulfate/thiosulfate import ATP-binding protein, putative (DUF506); Protein of unknown function (DUF506) ; Contains the following InterPro domains- Protein of unknown function DUF506, plant (InterPro-IPR006502); BEST Arabidopsis thaliana protein match is- Protein of unknown function (DUF506) (TAIR-AT3G25240.1); Has 393 Blast hits to 390 proteins in 24 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 391; Viruses - 0; Other Eukaryotes - 2 (source- NCBI BLink) (298 aa)
           
  0.868
BT5
BTB/POZ and TAZ domain-containing protein 5; May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (368 aa)
     
   
  0.822
AT2G20670
Sugar phosphate exchanger, putative (DUF506); Protein of unknown function (DUF506) ; Located in chloroplast; Expressed in 22 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Protein of unknown function DUF506, plant (InterPro-IPR006502); BEST Arabidopsis thaliana protein match is- Protein of unknown function (DUF506) (TAIR-AT4G32480.1); Has 375 Blast hits to 373 proteins in 24 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 373; Viruses - 0; Other Eukaryotes - 2 (source- NCBI BLink) (294 aa)
     
   
  0.808
DREB26
Ethylene-responsive transcription factor ERF012; Transcriptional activator involved in the regulation of plant development and tolerance to abiotic stresses. Involved in salt and osmotic stress response pathways. May be regulated by the stress-related genes RD29A, RD22, DREB1A or P5CS during stress response. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity); Belongs to the AP2/ERF transcription factor family. ERF subfamily (230 aa)
     
   
  0.772
CML38
Calcium-binding protein CML38; Potential calcium sensor that binds calcium in vitro (177 aa)
     
   
  0.739
ERF-1
Ethylene responsive element binding factor 1; Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5 (268 aa)
     
   
  0.733
SZF1
Zinc finger CCCH domain-containing protein 47; Involved in salt stress response. May positively modulate plant tolerance to salt stress (580 aa)
     
   
  0.707
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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