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AT1G25510 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G25510" - Aspartyl protease-like protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G25510Aspartyl protease-like protein (483 aa)    
Predicted Functional Partners:
AT5G47510
Sec14p-like phosphatidylinositol transfer family protein; Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro (By similarity) (376 aa)
           
  0.731
AT5G19100
Eukaryotic aspartyl protease family protein (391 aa)
           
  0.731
AT1G69100
Aspartic-type endopeptidase (367 aa)
           
  0.680
AT1G25520
Putative transmembrane protein (230 aa)
           
  0.636
PTR4
Peptide transporter 4 (545 aa)
           
  0.630
AT4G22050
Aspartyl protease family protein (354 aa)
     
   
  0.616
EXPB5
Expansin B5; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found (By similarity) (252 aa)
           
  0.607
RDUF2
C3H4 type zinc finger protein (407 aa)
           
  0.600
AT1G25530
Lysine histidine transporter-like 6; Amino acid transporter (440 aa)
           
  0.600
AT4G04460
Phytepsin; Involved in the processing and degradation of storage proteins (508 aa)
           
  0.552
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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