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STRINGSTRING
AT1G25530 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G25530" - Transmembrane amino acid transporter family protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G25530Transmembrane amino acid transporter family protein; Amino acid transporter (440 aa)    
Predicted Functional Partners:
AT1G25520
Uncharacterized protein family (UPF0016); Involved in response to karrikin; Located in membrane; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Uncharacterised protein family UPF0016 (InterPro-IPR001727); BEST Arabidopsis thaliana protein match is- Uncharacterized protein family (UPF0016) (TAIR-AT1G68650.1); Has 1806 Blast hits to 1733 proteins in 669 species- Archae - 27; Bacteria - 1021; Metazoa - 159; Fungi - 140; Plants - 210; Viruses - 0; Other Eukaryotes - 249 (source- NCBI BLink) (230 aa)
       
 
  0.861
AT1G25510
Eukaryotic aspartyl protease family protein; Its function is described as aspartic-type endopeptidase activity; Involved in proteolysis; Located in endomembrane system; Expressed in 13 plant structures; Expressed during 6 growth stages; Contains the following InterPro domains- Peptidase aspartic (InterPro-IPR021109), Peptidase aspartic, catalytic (InterPro-IPR009007), Peptidase A1 (InterPro-IPR001461); BEST Arabidopsis thaliana protein match is- Eukaryotic aspartyl protease family protein (TAIR-AT3G18490.1); Has 4139 Blast hits to 4120 proteins in 342 species- Archae - 0; Bacteria - 0; [...] (483 aa)
     
   
  0.811
AT1G25550
Myb-like transcription factor family protein; Probable transcription factor involved in phosphate signaling in roots (344 aa)
           
  0.700
BCS1
Protein HYPER-SENSITIVITY-RELATED 4; Cytochrome BC1 synthesis (BCS1); Its function is described as nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; Located in mitochondrion; Expressed in 24 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- ATPase, AAA-type, core (InterPro-IPR003959), ATPase, AAA+ type, core (InterPro-IPR003593), ATPase, AAA-type, conserved site (InterPro-IPR003960); BEST Arabidopsis thaliana protein match is- P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR-AT [...] (576 aa)
       
 
  0.641
MUR4
NAD(P)-binding Rossmann-fold superfamily protein; Encodes a type-II membrane protein that catalyzes 4-epimerization of UDP-D-Xylose to UDP-L-Arabinose in vitro, the nucleotide sugar used by glycosyltransferases in the arabinosylation of cell wall polysaccharides and wall-resident proteoglycans; Belongs to the NAD(P)-dependent epimerase/dehydratase family (419 aa)
           
  0.593
TEM1
AP2/ERF and B3 domain-containing transcription repressor TEM1; Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT. Novel transcriptional regulator involved in ethylene signaling. Promoter bound by EIN3. EDF1 in turn, binds to promoter elements in ethylene responsive genes (361 aa)
           
  0.497
JAL22
Jacalin-related lectin 22; Inhibitor-type lectin that may regulate the correct polymerization and activation of BGLU23/PYK10 upon tissue damage (458 aa)
     
   
  0.464
XTH20
Xyloglucan endotransglucosylase/hydrolase protein 20; Catalyzes xyloglucan endohydrolysis (XEH) (By similarity). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Involved in cell proliferation in the tissue reunion process of wounded inflorescence stems. Maybe a downstream target of NAC071 as a consequence of auxin action in wounded stems (282 aa)
     
   
  0.454
PFT1
Phytochrome and flowering time regulatory protein (PFT1); Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Positive regulator of s [...] (836 aa)
           
  0.444
EXPB5
Expansin-B5; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found (By similarity) (252 aa)
           
  0.432
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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