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SOFL1 protein (Arabidopsis thaliana) - STRING interaction network
"SOFL1" - SOB five-like 1 in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOFL1SOB five-like 1 (148 aa)    
Predicted Functional Partners:
SOB5
SUPPRESSOR OF PHYTOCHROME B 5 (144 aa)
           
  0.959
URH1
Uridine nucleosidase 1; Involved in pyrimidine breakdown rather than in pyrimidine salvage. Unable to use cytidine as a substrate (336 aa)
           
  0.676
CKX6
Cytokinin oxidase/dehydrogenase 6; Catalyzes the oxidation of cytokinins, a family of N(6)- substituted adenine derivatives that are plant hormones, where the substituent is an isopentenyl group (533 aa)
           
  0.606
IPT9
Isopentenyltransferase 9; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A). Involved in the cis-type cytokinin biosynthesis (469 aa)
           
  0.600
CYP735A1
Member of CYP735A; Cytokinin hydroxylase that catalyzes the biosynthesis of trans-zeatin via the isopentenyladenine riboside 5’-monophosphate (iPRMP)-dependent pathway. Can use isopentenyladenosine-5’- monophosphate, isopentenyladenosine-5’-diphosphate and isopentenyladenosine-5’-triphosphate as substrate (518 aa)
           
  0.551
OBP3
OBF-binding protein 3 (368 aa)
           
  0.551
CYP735A2
Member of CYP735A; Cytokinin hydroxylase that catalyzes the biosynthesis of trans-zeatin via the isopentenyladenine riboside 5’-monophosphate (iPRMP)-dependent pathway. Can use isopentenyladenosine-5’- monophosphate, isopentenyladenosine-5’-diphosphate and isopentenyladenosine-5’-triphosphate as substrate (512 aa)
           
  0.499
BAS1
PHYB ACTIVATION TAGGED SUPPRESSOR 1; Cytochrome P450 involved in brassinosteroids (BRs) inactivation and regulation of BRs homeostasis. Inactivates the BRs castasterone and brassinolide through carbon 26 hydroxylation. Acts in association with CYP72C1 to inactivate BRs and modulate photomorphogenesis (520 aa)
           
  0.479
IPT1
Isopentenyltransferase 1; Involved in cytokinin biosynthesis. Catalyzes the transfer of an isopentenyl group from dimethylallyl diphosphate (DMAPP) to ATP, ADP and AMP. Adenine, adenosine, isopentenylpyrophosphate and 1-hydroxy-2-methyl-2-(E)-butenyl 4- diphosphate (HMBDP) are not used as substrates (357 aa)
           
  0.448
CKX1
Cytokinin dehydrogenase 1; Catalyzes the oxidation of cytokinins, a family of N(6)- substituted adenine derivatives that are plant hormones, where the substituent is an isopentenyl group (575 aa)
           
  0.420
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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